Ligand validation:5KAF

DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 5KAF designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KAF_DGD_C_516	36%	42%	0.211	0.914	0.86	1.43	2	9	0	0	94%	0.9394
5KAF_DGD_C_517	35%	43%	0.217	0.915	0.9	1.36	2	8	0	0	94%	0.9394
5KAF_DGD_c_518	34%	42%	0.208	0.903	0.86	1.42	2	8	0	0	94%	0.9394
5KAF_DGD_C_518	23%	42%	0.25	0.884	0.87	1.4	2	8	0	0	94%	0.9394
5KAF_DGD_c_519	19%	42%	0.263	0.869	0.89	1.38	2	8	0	0	94%	0.9394
5KAF_DGD_c_520	19%	42%	0.266	0.871	0.87	1.4	2	10	0	0	94%	0.9394
5KAF_DGD_H_103	16%	44%	0.268	0.848	0.87	1.34	1	7	0	0	94%	0.9394
5KAF_DGD_h_102	11%	44%	0.295	0.824	0.87	1.32	1	8	0	0	94%	0.9394
5V2C_DGD_C_516	95%	44%	0.067	0.983	0.89	1.29	5	10	0	0	94%	0.9394
7YQ7_DGD_C_518	87%	51%	0.084	0.967	0.83	1.07	3	5	0	0	94%	0.9394
8IR5_DGD_C_515	85%	48%	0.092	0.97	0.81	1.21	2	8	0	0	94%	0.9394
8IRC_DGD_C_517	85%	48%	0.096	0.973	0.83	1.2	2	8	0	0	94%	0.9394
5ZZN_DGD_c_517	85%	46%	0.09	0.966	1.05	1.06	3	5	0	0	94%	0.9394
7RF1_DGD_c_519	85%	36%	0.093	0.968	1.16	1.45	6	11	0	0	94%	0.9394

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.