Ligand validation:5GTH

DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 5GTH designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5GTH_DGD_C_519	49%	53%	0.173	0.932	0.82	1	2	6	0	0	94%	0.9394
5GTH_DGD_c_518	49%	50%	0.191	0.95	0.86	1.09	3	6	0	0	94%	0.9394
5GTH_DGD_c_516	40%	49%	0.227	0.95	0.83	1.16	2	6	0	0	94%	0.9394
5GTH_DGD_c_517	35%	51%	0.224	0.924	0.91	0.99	3	6	0	0	94%	0.9394
5GTH_DGD_C_517	34%	51%	0.233	0.929	0.82	1.07	2	5	0	0	94%	0.9394
5GTH_DGD_C_518	34%	52%	0.207	0.902	0.85	1.02	2	6	0	0	94%	0.9394
5GTH_DGD_H_102	30%	51%	0.25	0.924	0.88	1	3	6	0	0	94%	0.9394
5GTH_DGD_h_102	22%	50%	0.265	0.892	0.89	1.03	3	5	0	0	94%	0.9394
5V2C_DGD_C_516	95%	44%	0.067	0.983	0.89	1.29	5	10	0	0	94%	0.9394
7YQ7_DGD_C_518	87%	51%	0.084	0.967	0.83	1.07	3	5	0	0	94%	0.9394
8IR5_DGD_C_515	85%	48%	0.092	0.97	0.81	1.21	2	8	0	0	94%	0.9394
8IRC_DGD_C_517	85%	48%	0.096	0.973	0.83	1.2	2	8	0	0	94%	0.9394
5ZZN_DGD_c_517	85%	46%	0.09	0.966	1.05	1.06	3	5	0	0	94%	0.9394
7RF1_DGD_c_519	85%	36%	0.093	0.968	1.16	1.45	6	11	0	0	94%	0.9394

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.