X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7283.1525% ethanol, 0.1 M Tris pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 283.15K
Crystal Properties
Matthews coefficientSolvent content
2.550.76

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 279.48α = 90
b = 40.873β = 92.01
c = 95.249γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 300 mm CCD2009-10-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-D0.97626APS21-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.238.799.90.0420.04214.25552955529
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.399.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.2124.95153151530272098.690.222580.220640.25878RANDOM35.142
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.32-0.30.280.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.717
r_dihedral_angle_4_deg16.897
r_dihedral_angle_3_deg13.652
r_dihedral_angle_1_deg6.695
r_scangle_it2.673
r_scbond_it1.582
r_angle_refined_deg1.346
r_mcangle_it0.917
r_angle_other_deg0.845
r_mcbond_it0.476
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.717
r_dihedral_angle_4_deg16.897
r_dihedral_angle_3_deg13.652
r_dihedral_angle_1_deg6.695
r_scangle_it2.673
r_scbond_it1.582
r_angle_refined_deg1.346
r_mcangle_it0.917
r_angle_other_deg0.845
r_mcbond_it0.476
r_mcbond_other0.108
r_chiral_restr0.075
r_bond_refined_d0.009
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7508
Nucleic Acid Atoms
Solvent Atoms189
Heterogen Atoms39

Software

Software
Software NamePurpose
MAR345dtbdata collection
SHARPphasing
REFMACrefinement
XDSdata reduction
SCALAdata scaling