X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP629550mM sodium Cacodylate pH 6.0, 10 mM magnesium sulfate, 1.9 M lithium sulfate 1% ethylene glycol, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
3.6766.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 191.2α = 90
b = 76.4β = 101.9
c = 53.1γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray77CCD2003-06-30MSINGLE WAVELENGTH
21x-ray77CCD2003-10-23MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X9A0.9795NSLSX9A
2SYNCHROTRONNSLS BEAMLINE X250.97857,0.97885,0.96486NSLSX25

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,23.23099.20.06418.5123592
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
3.23.31992.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT3.330113949498102092.470.257420.250260.32464RANDOM42.835
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.462.220.364.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg8.531
r_scangle_it6.001
r_scbond_it3.533
r_angle_refined_deg3.009
r_mcangle_it2.546
r_mcbond_it1.363
r_symmetry_vdw_refined0.41
r_nbd_refined0.377
r_symmetry_hbond_refined0.369
r_xyhbond_nbd_refined0.302
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg8.531
r_scangle_it6.001
r_scbond_it3.533
r_angle_refined_deg3.009
r_mcangle_it2.546
r_mcbond_it1.363
r_symmetry_vdw_refined0.41
r_nbd_refined0.377
r_symmetry_hbond_refined0.369
r_xyhbond_nbd_refined0.302
r_chiral_restr0.174
r_bond_refined_d0.033
r_gen_planes_refined0.012
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_gen_planes_other
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3550
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
MLPHAREphasing