2XJZ
Crystal structure of the LMO2:LDB1-LID complex, C2 crystal form
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | F_UNCLASSIFIED | e2xjzD5 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF00412 | e2xjzD4 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00412 | ECOD (1.6) |
E | F_UNCLASSIFIED | e2xjzE3 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF00412 | e2xjzE4 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00412 | ECOD (1.6) |
A | F_UNCLASSIFIED | e2xjzA3 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00412 | e2xjzA4 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00412 | ECOD (1.6) |
B | F_UNCLASSIFIED | e2xjzB4 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00412 | e2xjzB2 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00412 | ECOD (1.6) |
C | F_UNCLASSIFIED | e2xjzC5 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF00412 | e2xjzC4 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00412 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
E | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
A | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
B | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
C | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00412 | LIM domain (LIM) | LIM domain | This family represents two copies of the LIM structural domain. | Domain | |
F [auth I], G [auth J], H [auth K], I [auth L], J [auth M] | PF17916 | LIM interaction domain (LID) (LID) | LIM interaction domain (LID) | LIM-homeodomain (LIM-HD) proteins are transcription factors that are critical in the development of many cell types and tissues. The activity of LIM-HD proteins is dependent on the essential cofactor LIM domain-binding protein 1 (Ldb1). This entry re ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001781 | Zinc finger, LIM-type | Domain | |
F [auth I], G [auth J], H [auth K], I [auth L], J [auth M] | IPR029005 | LIM-domain binding protein/SEUSS | Family |
F [auth I], G [auth J], H [auth K], I [auth L], J [auth M] | IPR041363 | LIM interaction domain | Domain |