1YSE
Solution structure of the MAR-binding domain of SATB1
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1ysea1 | All alpha proteins | lambda repressor-like DNA-binding domains | lambda repressor-like DNA-binding domains | CUT domain | DNA-binding protein SATB1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8034992 | 3000119 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.260.40 | Mainly Alpha | Orthogonal Bundle | 434 Repressor (Amino-terminal Domain) | lambda repressor-like DNA-binding domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02376 | CUT domain (CUT) | CUT domain | The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001356 | Homeobox domain | Domain | |
IPR038216 | SATB, CUTL domain superfamily | Homologous Superfamily | |
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily | |
IPR039673 | DNA-binding protein SATB1/SATB2 | Family | |
IPR032355 | SATB, CUT1-like DNA-binding domain | Domain | |
IPR003350 | CUT domain | Domain | |
IPR032392 | SATB, ubiquitin-like oligomerisation domain | Domain | |
IPR038224 | SATB, ULD domain superfamily | Homologous Superfamily | |
IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |