Download MendeleyMakD from the mak operon of Vibrio cholerae
Persson, K., Nagampalli, R., Heidler, T., Wai, S.N.To be published.
6TCT
MakD from the mak operon of Vibrio cholerae
- PDB DOI: https://doi.org/10.2210/pdb6TCT/pdb
- Classification: UNKNOWN FUNCTION
- Organism(s): Vibrio cholerae O1 biovar El Tor str. N16961
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2019-11-06 Released: 2020-11-18
- Funding Organization(s): Swedish Research Council
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.02 Å
- R-Value Free: 0.236
- R-Value Work: 0.187
- R-Value Observed: 0.189
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| MakD | A [auth B], B [auth D], C [auth A], D [auth C] | 126 | Vibrio cholerae O1 biovar El Tor str. N16961 | Mutation(s): 0 Gene Names: VC_A0880 |  |
UniProt | |||||
Find proteins for Q9KL67 (Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)) Explore Q9KL67 Go to UniProtKB: Q9KL67 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9KL67 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.02 Å
- R-Value Free: 0.236
- R-Value Work: 0.187
- R-Value Observed: 0.189
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 42.327 | α = 90 |
| b = 70.886 | β = 90 |
| c = 185.715 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PDB_EXTRACT | data extraction |
| Auto-Rickshaw | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2020-11-18 Deposition Author(s): Persson, K., Nagampalli, R., Heidler, T., Wai, S.N.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Swedish Research Council | Sweden | 2016-05009 |
| Swedish Research Council | Sweden | 2018-02914 |
Revision History (Full details and data files)
- Version 1.0: 2020-11-18
Type: Initial release
