Crystal structure of Inorganic pyrophosphatase from Legionella pneumophila Philadelphia 1
Abendroth, J., Mayclin, S.J., Lorimer, D.D., Horanyi, P.S., Edwards, T.E.To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Inorganic pyrophosphatase | 186 | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 | Mutation(s): 0  Gene Names: ppa, lpg2764 EC: 3.6.1.1 | ||
UniProt | |||||
Find proteins for Q5ZRW2 (Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)) Explore Q5ZRW2  Go to UniProtKB:  Q5ZRW2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5ZRW2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MRD Query on MRD | K [auth B] | (4R)-2-METHYLPENTANE-2,4-DIOL C6 H14 O2 SVTBMSDMJJWYQN-RXMQYKEDSA-N | |||
MPD Query on MPD | I [auth A] L [auth B] M [auth C] O [auth D] Q [auth E] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
ALA Query on ALA | J [auth A], P [auth E] | ALANINE C3 H7 N O2 QNAYBMKLOCPYGJ-REOHCLBHSA-N | |||
NA Query on NA | G [auth A], H [auth A], N [auth D], T [auth F] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 64.08 | α = 90 |
b = 119.94 | β = 109.59 |
c = 74.9 | γ = 90 |
Software Name | Purpose |
---|---|
XDS | data reduction |
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
MoRDa | phasing |
ARP/wARP | model building |
BUCCANEER | model building |
Coot | model building |
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