Download MendeleyStructure of Hydroxyethylthiazole Kinase Protein from Pyrococcus Horikoshii Ot3
Jeyakanthan, J., Kuramitsu, S., Yokoyama, S.To be published.
3HPD
Structure of hydroxyethylthiazole kinase protein from pyrococcus horikoshii OT3
- PDB DOI: https://doi.org/10.2210/pdb3HPD/pdb
- Entry: 3HPD supersedes: 1V8A
- Classification: TRANSFERASE
- Organism(s): Pyrococcus horikoshii OT3
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-06-04 Released: 2009-06-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.184
- R-Value Work: 0.164
- R-Value Observed: 0.164
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hydroxyethylthiazole kinase | 265 | Pyrococcus horikoshii OT3 | Mutation(s): 0 EC: 2.7.1.50 |  | |
UniProt | |||||
Find proteins for O58877 (Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)) Explore O58877 Go to UniProtKB: O58877 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O58877 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | B [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.184
- R-Value Work: 0.164
- R-Value Observed: 0.164
- Space Group: I 2 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 112.242 | α = 90 |
| b = 112.242 | β = 90 |
| c = 112.242 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| AMoRE | phasing |
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2009-06-16 Deposition Author(s): Jeyakanthan, J., Thamotharan, S., Kuramitsu, S., Yokoyama, S., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
- This entry supersedes: 1V8A
Revision History (Full details and data files)
- Version 1.0: 2009-06-16
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2023-11-01
Changes: Data collection, Database references, Derived calculations, Refinement description
