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STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX CO-CRYSTALLIZED WITH AN ANTIBODY FV-FRAGMENT
 
 
DOI:10.2210/pdb1ezv/pdb
1EZV
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Oxidoreductase/electron Transport
    Structure Weight: 247126.66
     
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I
    Polymer:1Type:polypeptide(L)Length:430
    Chains:A
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 24-457
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2
    Polymer:2Type:polypeptide(L)Length:352
    Chains:B
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 17-368
    Molecule:CYTOCHROME B
    Polymer:3Type:polypeptide(L)Length:385
    Chains:C
    Molecule:CYTOCHROME C1
    Polymer:4Type:polypeptide(L)Length:245
    Chains:D
    Fragment:RESIDUES 62-306
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT
    Polymer:5Type:polypeptide(L)Length:185
    Chains:E
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 31-215
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 17 KD PROTEIN
    Polymer:6Type:polypeptide(L)Length:74
    Chains:H
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 74-147
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN
    Polymer:7Type:polypeptide(L)Length:125
    Chains:F
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 3-127
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C
    Polymer:8Type:polypeptide(L)Length:93
    Chains:G
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 2-94
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.3 KD PROTEIN
    Polymer:9Type:polypeptide(L)Length:55
    Chains:I
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 4-58
    Molecule:HEAVY CHAIN (VH) OF FV-FRAGMENT
    Polymer:10Type:polypeptide(L)Length:127
    Chains:X
    Molecule:LIGHT CHAIN (VL) OF FV-FRAGMENT
    Polymer:11Type:polypeptide(L)Length:107
    Chains:Y
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 2
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 3
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 4
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 5
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 6
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 7
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 8
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 9
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 10
    Scientific Name: Mus musculus Go to NCBI Taxonomy entry Common Name: House mouse Expression System: Escherichia coli  
    Polymer: 11
    Scientific Name: Mus musculus Go to NCBI Taxonomy entry Common Name: House mouse Expression System: Escherichia coli  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1BCC  CYTOCHROME BC1 COMPLEX FROM CHICKEN 
    1BE3  CYTOCHROME BC1 COMPLEX FROM BOVINE 
    1BGY  CYTOCHROME BC1 COMPLEX FROM BOVINE 
    1QCR  CRYSTAL STRUCTURE OF BOVINE MITOCHONDRIAL CYTOCHROME BC1 COMPLEX 
    2BCC  STIGMATELLIN BOUND CYTOCHROME BC1 COMPLEX FROM CHICKEN 
    3BCC  STIGMATELLIN AND ANTIMYCIN BOUND CYTOCHROME BC1 COMPLEX FROM CHICKEN 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    FES     FE2/S2 (INORGANIC) CLUSTER Fe2 S2 3DLigand Explorer Link out to Ligand Expos:FES Link out to SuperLigands:FES Link out to SuperHapten:FES
    HEM     PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 3DLigand Explorer Link out to Ligand Expos:HEM Link out to SuperLigands:HEM Link out to SuperHapten:HEM
    SMA     STIGMATELLIN A C30 H42 O7 3DLigand Explorer Link out to Ligand Expos:SMA Link out to SuperLigands:SMA Link out to SuperHapten:SMA
    UQ6     5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22- HEXAENYL)-2,3-DIMETHOXY
    -6-METHYL-BENZENE- 1,4-DIOL     		C39 H60 O4 3DLigand Explorer Link out to Ligand Expos:UQ6 Link out to SuperLigands:UQ6 Link out to SuperHapten:UQ6
     
     
  •  
    Move Section Derived Data Hide
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Hunte, C.,   Koepke, J.,   Lange, C.,   Rossmanith, T.,   Michel, H.

    Deposition:   2000-05-12
    Release:   2001-05-16
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 2.30
    R-Value: 0.253 (obs.)
    R-Free: 0.254
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 214.47 α = 90.00 
    b = 163.92 β = 117.50 
    c = 147.27 γ = 90.00