Ligand validation:6QPH

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 6QPH designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6QPH_CLA_B_1217	35%	18%	0.181	0.921	1.63	2.07	9	13	0	1	71%	0.7077
6QPH_CLA_B_1235	34%	21%	0.217	0.913	1.43	2.02	10	16	7	1	92%	0.9231
6QPH_CLA_B_1209	33%	17%	0.171	0.904	1.63	2.11	9	14	0	1	71%	0.7077
6QPH_CLA_B_1204	33%	17%	0.182	0.905	1.58	2.17	9	15	5	1	75%	0.7538
6QPH_CLA_4_605	31%	16%	0.193	0.908	1.65	2.22	10	13	8	1	75%	0.7538
6QPH_CLA_4_603	31%	17%	0.19	0.904	1.61	2.15	9	14	4	1	75%	0.7538
6QPH_CLA_A_1105	31%	17%	0.19	0.903	1.57	2.2	10	14	7	1	75%	0.7538
6QPH_CLA_B_1210	28%	18%	0.212	0.912	1.5	2.2	8	13	7	1	75%	0.7538
6QPH_CLA_B_1237	27%	17%	0.167	0.858	1.58	2.19	9	15	1	1	75%	0.7538
6QPH_CLA_4_608	26%	18%	0.204	0.899	1.58	2.12	9	12	2	1	71%	0.7077
6QPH_CLA_A_1109	24%	17%	0.171	0.844	1.56	2.23	10	15	11	1	75%	0.7538
6QPH_CLA_B_1231	23%	21%	0.264	0.904	1.45	2.01	7	17	7	1	92%	0.9231
6QPH_CLA_4_601	22%	17%	0.242	0.904	1.53	2.2	8	19	10	1	75%	0.7538
6QPH_CLA_4_604	22%	16%	0.223	0.881	1.61	2.23	9	15	10	1	75%	0.7538
6QPH_CLA_B_1227	21%	16%	0.201	0.863	1.72	2.16	10	13	6	1	69%	0.6923
6QPH_CLA_2_603	21%	18%	0.231	0.891	1.63	2.06	8	12	1	1	71%	0.7077
6QPH_CLA_4_612	21%	16%	0.204	0.854	1.62	2.22	10	17	11	1	75%	0.7538
6QPH_CLA_B_1216	20%	17%	0.224	0.874	1.54	2.2	9	16	5	1	75%	0.7538
6QPH_CLA_J_1302	20%	17%	0.237	0.885	1.58	2.15	8	13	6	1	75%	0.7538
6QPH_CLA_A_1110	20%	17%	0.223	0.869	1.53	2.24	9	16	8	1	75%	0.7538
6QPH_CLA_1_611	20%	17%	0.21	0.854	1.61	2.19	8	16	6	1	75%	0.7538
6QPH_CLA_B_1234	20%	17%	0.249	0.894	1.56	2.21	10	16	6	1	75%	0.7538
6QPH_CLA_3_605	20%	19%	0.246	0.899	1.6	2.03	11	12	8	1	71%	0.7077
6QPH_CLA_1_606	19%	17%	0.222	0.871	1.61	2.2	8	15	10	1	69%	0.6923
6QPH_CLA_B_1222	19%	16%	0.288	0.925	1.62	2.24	11	14	6	1	75%	0.7538
6QPH_CLA_B_1240	18%	23%	0.262	0.851	1.4	1.91	9	16	4	1	100%	1
6QPH_CLA_1_604	18%	16%	0.237	0.869	1.58	2.24	9	18	10	1	75%	0.7538
6QPH_CLA_F_1301	18%	16%	0.24	0.876	1.65	2.22	6	15	6	1	72%	0.7231
6QPH_CLA_A_1139	18%	18%	0.275	0.898	1.55	2.17	8	18	8	1	80%	0.8
6QPH_CLA_2_604	17%	17%	0.199	0.82	1.55	2.18	8	16	4	1	75%	0.7538
6QPH_CLA_B_1239	16%	23%	0.284	0.853	1.38	1.92	9	15	8	1	100%	1
6QPH_CLA_4_602	16%	18%	0.271	0.882	1.56	2.15	8	14	4	1	75%	0.7538
6QPH_CLA_B_1206	15%	17%	0.275	0.884	1.57	2.2	9	15	5	1	75%	0.7538
6QPH_CLA_A_1122	15%	17%	0.26	0.866	1.56	2.19	9	15	5	1	75%	0.7538
6QPH_CLA_4_609	15%	16%	0.289	0.894	1.57	2.29	7	16	9	1	75%	0.7538
6QPH_CLA_A_1106	15%	23%	0.325	0.886	1.38	1.97	9	15	13	1	100%	1
6QPH_CLA_B_1201	15%	17%	0.253	0.854	1.61	2.14	10	14	2	1	75%	0.7538
6QPH_CLA_A_1102	14%	17%	0.271	0.883	1.63	2.16	10	13	3	1	69%	0.6923
6QPH_CLA_B_1228	14%	23%	0.308	0.872	1.39	1.97	9	16	6	1	92%	0.9231
6QPH_CLA_F_1302	14%	18%	0.232	0.824	1.55	2.11	11	15	4	1	75%	0.7538
6QPH_CLA_A_1103	14%	20%	0.306	0.882	1.49	2.06	9	16	9	1	85%	0.8462
6QPH_CLA_A_1129	14%	18%	0.282	0.876	1.58	2.14	9	16	0	1	74%	0.7385
6QPH_CLA_3_615	13%	17%	0.269	0.867	1.67	2.1	9	13	2	1	71%	0.7077
6QPH_CLA_2_615	13%	18%	0.259	0.845	1.53	2.16	10	15	1	1	77%	0.7692
6QPH_CLA_1_612	13%	21%	0.28	0.837	1.46	2.02	9	14	7	2	92%	0.9231
6QPH_CLA_B_1205	13%	17%	0.259	0.845	1.56	2.25	10	14	5	1	75%	0.7538
6QPH_CLA_A_1013	13%	23%	0.316	0.859	1.39	1.92	10	16	19	1	100%	1
6QPH_CLA_B_1202	13%	17%	0.292	0.875	1.57	2.21	7	15	5	1	75%	0.7538
6QPH_CLA_B_1220	13%	19%	0.255	0.82	1.52	2.06	8	17	3	1	85%	0.8462
6QPH_CLA_A_1107	12%	17%	0.311	0.892	1.58	2.2	8	14	9	1	75%	0.7538
6QPH_CLA_A_1130	12%	19%	0.286	0.846	1.5	2.11	9	16	4	1	85%	0.8462
6QPH_CLA_A_1138	12%	23%	0.388	0.922	1.38	1.93	9	14	9	1	100%	1
6QPH_CLA_A_1136	12%	17%	0.245	0.816	1.58	2.21	8	14	7	1	75%	0.7538
6QPH_CLA_2_601	11%	19%	0.255	0.822	1.5	2.11	8	15	13	1	75%	0.7538
6QPH_CLA_B_1213	11%	19%	0.259	0.822	1.48	2.15	9	17	2	1	75%	0.7538
6QPH_CLA_A_1125	11%	17%	0.294	0.858	1.55	2.19	8	15	8	1	75%	0.7538
6QPH_CLA_A_1134	11%	17%	0.219	0.779	1.56	2.24	9	16	3	1	75%	0.7538
6QPH_CLA_A_1133	11%	17%	0.275	0.833	1.59	2.14	9	14	4	1	75%	0.7538
6QPH_CLA_B_1230	11%	16%	0.299	0.857	1.58	2.27	10	13	13	1	75%	0.7538
6QPH_CLA_B_1232	10%	17%	0.281	0.83	1.6	2.21	9	14	6	1	75%	0.7538
6QPH_CLA_1_603	10%	16%	0.275	0.835	1.74	2.11	10	14	8	1	69%	0.6923
6QPH_CLA_A_1120	9%	17%	0.257	0.797	1.58	2.21	9	16	1	1	75%	0.7538
6QPH_CLA_4_607	9%	18%	0.233	0.771	1.58	2.13	10	15	3	1	75%	0.7538
6QPH_CLA_2_612	9%	16%	0.276	0.815	1.63	2.19	9	14	9	1	75%	0.7538
6QPH_CLA_2_605	9%	22%	0.256	0.749	1.4	1.99	9	18	5	1	100%	1
6QPH_CLA_1_602	9%	18%	0.306	0.846	1.6	2.11	10	14	1	1	71%	0.7077
6QPH_CLA_B_1229	9%	22%	0.371	0.858	1.43	1.95	9	17	4	1	100%	1
6QPH_CLA_B_1212	9%	17%	0.276	0.815	1.63	2.11	8	14	3	1	69%	0.6923
6QPH_CLA_B_1021	8%	22%	0.328	0.811	1.42	1.97	10	16	21	1	100%	1
6QPH_CLA_3_610	8%	18%	0.292	0.817	1.56	2.11	9	15	5	1	75%	0.7538
6QPH_CLA_A_1137	8%	16%	0.306	0.821	1.58	2.24	9	17	5	1	75%	0.7538
6QPH_CLA_A_1140	8%	20%	0.343	0.842	1.47	2.05	11	13	5	1	85%	0.8462
6QPH_CLA_3_601	8%	15%	0.269	0.781	1.64	2.3	8	15	13	1	75%	0.7538
6QPH_CLA_B_1223	8%	15%	0.34	0.851	1.63	2.28	9	16	4	1	77%	0.7692
6QPH_CLA_A_1012	8%	21%	0.388	0.871	1.51	1.99	11	17	27	1	92%	0.9231
6QPH_CLA_B_1218	8%	17%	0.245	0.754	1.55	2.2	10	15	6	1	75%	0.7538
6QPH_CLA_B_1214	8%	17%	0.352	0.863	1.59	2.18	12	17	11	1	75%	0.7538
6QPH_CLA_A_1127	7%	16%	0.338	0.847	1.61	2.26	10	16	4	1	75%	0.7538
6QPH_CLA_2_608	7%	16%	0.355	0.864	1.57	2.27	9	16	3	1	75%	0.7538
6QPH_CLA_B_1225	7%	17%	0.329	0.837	1.54	2.2	8	16	3	1	75%	0.7538
6QPH_CLA_A_1123	7%	17%	0.313	0.821	1.63	2.13	9	15	11	1	74%	0.7385
6QPH_CLA_2_602	7%	16%	0.247	0.746	1.6	2.24	9	15	6	1	75%	0.7538
6QPH_CLA_B_1226	7%	16%	0.294	0.792	1.57	2.27	10	16	7	1	75%	0.7538
6QPH_CLA_A_1118	7%	17%	0.319	0.817	1.56	2.2	10	14	2	1	75%	0.7538
6QPH_CLA_1_607	7%	17%	0.319	0.823	1.63	2.12	9	13	5	1	71%	0.7077
6QPH_CLA_3_606	7%	17%	0.233	0.733	1.62	2.15	8	14	15	1	69%	0.6923
6QPH_CLA_2_607	7%	16%	0.371	0.864	1.6	2.25	8	15	4	1	75%	0.7538
6QPH_CLA_A_1101	6%	15%	0.329	0.827	1.7	2.21	9	15	3	1	69%	0.6923
6QPH_CLA_4_615	6%	20%	0.319	0.786	1.47	2.09	7	16	4	1	85%	0.8462
6QPH_CLA_A_1104	6%	20%	0.399	0.853	1.39	2.11	9	17	4	1	92%	0.9231
6QPH_CLA_A_1115	6%	16%	0.401	0.883	1.61	2.27	9	15	3	1	75%	0.7538
6QPH_CLA_A_1124	6%	17%	0.314	0.793	1.56	2.22	9	16	11	1	75%	0.7538
6QPH_CLA_1_601	6%	18%	0.313	0.791	1.54	2.13	10	15	10	1	75%	0.7538
6QPH_CLA_A_1128	6%	16%	0.342	0.812	1.61	2.25	10	15	9	1	75%	0.7538
6QPH_CLA_3_612	5%	20%	0.341	0.788	1.46	2.09	10	17	8	1	85%	0.8462
6QPH_CLA_A_1119	5%	17%	0.348	0.807	1.6	2.2	8	15	4	1	75%	0.7538
6QPH_CLA_A_1135	5%	17%	0.296	0.753	1.55	2.22	9	14	3	1	75%	0.7538
6QPH_CLA_B_1207	5%	3%	0.297	0.821	3.8	2.63	13	12	0	1	38%	0.3846
6QPH_CLA_A_1113	5%	17%	0.356	0.825	1.65	2.09	10	13	5	1	69%	0.6923
6QPH_CLA_B_1236	5%	16%	0.337	0.794	1.58	2.26	9	17	4	1	75%	0.7538
6QPH_CLA_1_615	5%	23%	0.378	0.786	1.37	1.96	10	15	2	1	100%	1
6QPH_CLA_A_1108	5%	16%	0.322	0.781	1.67	2.16	9	15	5	1	71%	0.7077
6QPH_CLA_A_1112	5%	17%	0.393	0.845	1.58	2.2	9	16	1	1	75%	0.7538
6QPH_CLA_B_1219	5%	18%	0.34	0.789	1.55	2.17	10	15	6	1	75%	0.7538
6QPH_CLA_1_613	5%	18%	0.305	0.76	1.57	2.13	9	14	20	1	69%	0.6923
6QPH_CLA_3_611	5%	17%	0.341	0.794	1.61	2.12	8	12	5	1	71%	0.7077
6QPH_CLA_A_1117	5%	17%	0.347	0.791	1.58	2.23	10	15	6	1	75%	0.7538
6QPH_CLA_3_613	5%	17%	0.364	0.815	1.65	2.1	7	12	14	1	71%	0.7077
6QPH_CLA_1_608	4%	16%	0.451	0.899	1.64	2.19	9	13	11	1	71%	0.7077
6QPH_CLA_1_605	4%	17%	0.394	0.827	1.59	2.16	8	15	7	1	74%	0.7385
6QPH_CLA_B_1238	4%	17%	0.318	0.728	1.57	2.17	8	15	1	1	77%	0.7692
6QPH_CLA_3_603	4%	14%	0.289	0.711	1.65	2.4	10	18	11	1	69%	0.6923
6QPH_CLA_A_1121	4%	17%	0.152	0.551	1.57	2.19	9	14	2	1	75%	0.7538
6QPH_CLA_A_1132	3%	17%	0.448	0.845	1.57	2.24	10	15	3	1	75%	0.7538
6QPH_CLA_A_1141	3%	17%	0.355	0.743	1.56	2.19	8	16	2	1	77%	0.7692
6QPH_CLA_B_1221	3%	16%	0.367	0.753	1.59	2.28	8	17	5	1	75%	0.7538
6QPH_CLA_B_1208	3%	17%	0.294	0.671	1.6	2.19	8	16	0	1	75%	0.7538
6QPH_CLA_B_1211	3%	17%	0.385	0.752	1.56	2.2	10	13	7	1	75%	0.7538
6QPH_CLA_B_1022	3%	17%	0.377	0.734	1.54	2.21	9	18	10	1	77%	0.7692
6QPH_CLA_A_1111	2%	17%	0.331	0.683	1.49	2.28	8	18	20	1	75%	0.7538
6QPH_CLA_2_606	2%	16%	0.428	0.782	1.67	2.18	10	14	5	1	71%	0.7077
6QPH_CLA_A_1126	2%	15%	0.42	0.765	1.63	2.27	7	13	9	1	75%	0.7538
6QPH_CLA_B_1023	2%	22%	0.402	0.695	1.46	1.93	8	17	14	1	92%	0.9231
6QPH_CLA_B_1215	2%	14%	0.409	0.726	1.65	2.37	8	15	6	1	75%	0.7538
6QPH_CLA_A_1131	2%	17%	0.34	0.638	1.56	2.17	9	15	1	1	77%	0.7692
6QPH_CLA_B_1203	2%	17%	0.396	0.675	1.55	2.22	8	13	3	1	75%	0.7538
6QPH_CLA_A_1116	1%	17%	0.475	0.741	1.55	2.21	10	14	7	1	75%	0.7538
6QPH_CLA_3_608	1%	18%	0.35	0.609	1.59	2.1	10	14	2	1	74%	0.7385
6QPH_CLA_B_1224	1%	17%	0.431	0.668	1.57	2.16	9	15	4	1	75%	0.7538
6QPH_CLA_A_1114	1%	18%	0.522	0.722	1.6	2.11	11	12	5	1	71%	0.7077
6QPH_CLA_4_606	1%	17%	0.626	0.807	1.6	2.17	10	14	8	1	75%	0.7538
6QPH_CLA_3_607	0%	17%	0.398	0.381	1.56	2.17	9	16	0	1	77%	0.7692
8H2U_CLA_8_306	38%	11%	0.181	0.942	2.84	1.53	11	7	2	1	68%	0.6769
5V2C_CLA_B_604	99%	16%	0.049	0.986	1.64	2.25	13	20	0	1	100%	1
5B66_CLA_D_402	98%	13%	0.061	0.981	1.9	2.23	16	21	0	0	100%	1
7YQ7_CLA_D_401	98%	9%	0.059	0.979	2.09	2.56	19	28	0	0	100%	1
8OV5_CLA_O_601	97%	35%	0.065	0.983	1.45	1.23	8	4	0	0	100%	1
5ZZN_CLA_A_406	97%	17%	0.064	0.979	1.65	2.13	17	21	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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6QPH

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 6QPH designated by the RCSB