SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 6JLP designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6JLP_SQD_a_414 | 33% | 38% | 0.187 | 0.865 | 0.97 | 1.54 | 3 | 12 | 0 | 0 | 100% | 1 |
| 6JLP_SQD_A_409 | 22% | 39% | 0.242 | 0.861 | 0.99 | 1.45 | 3 | 10 | 0 | 0 | 100% | 1 |
| 6JLP_SQD_A_412 | 19% | 44% | 0.226 | 0.821 | 1.04 | 1.15 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6JLP_SQD_L_102 | 18% | 35% | 0.229 | 0.811 | 1.03 | 1.6 | 3 | 11 | 0 | 0 | 100% | 1 |
| 6JLP_SQD_B_621 | 17% | 40% | 0.241 | 0.819 | 1.01 | 1.37 | 3 | 8 | 0 | 0 | 100% | 1 |
| 6JLP_SQD_a_405 | 14% | 43% | 0.242 | 0.796 | 1.06 | 1.18 | 3 | 4 | 0 | 0 | 100% | 1 |
| 6JLP_SQD_F_104 | 9% | 32% | 0.287 | 0.817 | 1.18 | 1.62 | 3 | 10 | 0 | 0 | 80% | 0.7963 |
| 6JLP_SQD_f_102 | 3% | 35% | 0.31 | 0.671 | 1.2 | 1.44 | 3 | 8 | 0 | 0 | 80% | 0.7963 |
| 5V2C_SQD_a_413 | 94% | 24% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 77% | 23% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 32% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 75% | 33% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 75% | 32% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 33% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
