Ligand validation:6JLO

DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 6JLO designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6JLO_DGD_C_516	45%	48%	0.172	0.917	0.86	1.14	2	7	0	0	94%	0.9394
6JLO_DGD_c_519	44%	51%	0.178	0.917	0.83	1.05	2	7	0	0	94%	0.9394
6JLO_DGD_c_521	42%	51%	0.17	0.902	0.86	1.02	2	4	0	0	94%	0.9394
6JLO_DGD_c_520	31%	52%	0.193	0.873	0.88	0.96	2	3	0	0	94%	0.9394
6JLO_DGD_C_518	25%	51%	0.189	0.836	0.9	0.98	2	4	0	0	94%	0.9394
6JLO_DGD_H_102	23%	50%	0.203	0.838	0.87	1.06	2	6	0	0	94%	0.9394
6JLO_DGD_h_102	19%	51%	0.21	0.817	0.9	1	3	3	0	0	94%	0.9394
6JLO_DGD_C_517	9%	51%	0.228	0.726	0.87	1.03	2	7	0	0	94%	0.9394
6JLO_DGD_D_409	1%	45%	0.358	0.553	1.03	1.12	3	5	0	0	79%	0.7879
6JLO_DGD_d_408	0%	44%	0.47	0.31	0.93	1.29	2	7	0	0	94%	0.9394
5V2C_DGD_C_516	95%	44%	0.067	0.983	0.89	1.29	5	10	0	0	94%	0.9394
7YQ7_DGD_C_518	87%	51%	0.084	0.967	0.83	1.07	3	5	0	0	94%	0.9394
8IR5_DGD_C_515	85%	48%	0.092	0.97	0.81	1.21	2	8	0	0	94%	0.9394
8IRC_DGD_C_517	85%	48%	0.096	0.973	0.83	1.2	2	8	0	0	94%	0.9394
5ZZN_DGD_c_517	85%	46%	0.09	0.966	1.05	1.06	3	5	0	0	94%	0.9394
7RF1_DGD_c_519	85%	36%	0.093	0.968	1.16	1.45	6	11	0	0	94%	0.9394

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.