Ligand validation:6B5E

TYD: THYMIDINE-5'-DIPHOSPHATE

TYD is a Ligand Of Interest in 6B5E designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6B5E_TYD_B_304	96%	26%	0.066	0.974	1.17	1.98	2	4	0	0	100%	1
6B5E_TYD_G_303	93%	27%	0.075	0.972	1.15	1.91	2	2	0	0	100%	1
6B5E_TYD_A_303	93%	28%	0.077	0.974	1.2	1.84	1	3	0	0	100%	1
6B5E_TYD_D_303	92%	29%	0.077	0.968	1	1.94	1	4	0	0	100%	1
6B5E_TYD_C_303	88%	28%	0.088	0.963	1.11	1.92	1	2	0	0	100%	1
6B5E_TYD_H_303	74%	29%	0.111	0.942	1.08	1.87	1	4	0	0	100%	1
6B5K_TYD_B_304	83%	36%	0.089	0.948	1	1.61	2	2	0	0	100%	1
3OTI_TYD_B_377	99%	25%	0.054	0.987	1.12	2.08	1	2	0	0	100%	1
3EVO_TYD_A_160	99%	34%	0.057	0.988	1	1.68	1	3	0	0	100%	1
5WXK_TYD_A_401	99%	35%	0.06	0.987	0.99	1.64	1	2	0	0	100%	1
3EM1_TYD_B_143	98%	34%	0.059	0.984	1.01	1.71	1	3	0	0	100%	1
1LVW_TYD_C_3006	98%	9%	0.057	0.978	1.68	2.93	5	3	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.