Ligand validation:6APL

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 6APL designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6APL_NAG_B_402	74%	86%	0.104	0.934	0.18	0.53	-	-	0	0	100%	0.9333
6APL_NAG_F_402	48%	88%	0.191	0.935	0.18	0.48	-	-	0	0	100%	0.9333
6APL_NAG_A_402	41%	83%	0.173	0.887	0.3	0.47	-	-	0	0	100%	0.9333
6APL_NAG_C_402	19%	90%	0.252	0.844	0.25	0.37	-	-	0	0	100%	0.9333
6APL_NAG_D_402	16%	89%	0.295	0.869	0.24	0.4	-	-	0	0	100%	0.9333
6APL_NAG_D_404	16%	76%	0.205	0.773	0.26	0.66	-	1	0	0	100%	0.9333
6APL_NAG_C_403	14%	70%	0.305	0.857	0.67	0.47	-	-	1	0	100%	0.9333
6APL_NAG_A_403	11%	59%	0.279	0.796	0.77	0.79	1	1	0	0	100%	0.9333
6APL_NAG_D_403	10%	78%	0.235	0.74	0.5	0.39	-	-	0	0	100%	0.9333
6APL_NAG_B_403	8%	58%	0.231	0.704	0.47	1.11	-	1	0	0	100%	0.9333
6APJ_NAG_A_501	57%	89%	0.145	0.922	0.27	0.38	-	-	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.