SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5V2C designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5V2C_SQD_a_413 | 94% | 24% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_A_612 | 94% | 24% | 0.075 | 0.975 | 1.12 | 2.16 | 4 | 14 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_a_417 | 69% | 38% | 0.103 | 0.918 | 1.25 | 1.26 | 4 | 5 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_A_616 | 56% | 33% | 0.13 | 0.902 | 1.18 | 1.56 | 4 | 10 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_b_633 | 53% | 22% | 0.128 | 0.889 | 1.43 | 1.99 | 5 | 16 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_l_102 | 44% | 26% | 0.144 | 0.873 | 1.3 | 1.86 | 4 | 14 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_x_101 | 35% | 27% | 0.199 | 0.888 | 1.26 | 1.83 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_F_104 | 20% | 20% | 0.256 | 0.858 | 1.43 | 2.09 | 5 | 17 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_a_424 | 13% | 23% | 0.26 | 0.796 | 1.31 | 2.01 | 3 | 14 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_A_622 | 10% | 31% | 0.271 | 0.774 | 1.36 | 1.52 | 4 | 9 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_h_105 | 0% | 29% | 0.45 | 0.509 | 1.43 | 1.53 | 6 | 9 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 77% | 23% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 32% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 75% | 33% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 75% | 32% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 33% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
