Ligand validation:5OY0

SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 5OY0 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5OY0_SQD_L_5001	25%	55%	0.214	0.86	0.8	0.93	-	4	0	0	94%	0.9444
5OY0_SQD_L_5002	20%	56%	0.227	0.83	0.8	0.89	-	3	0	0	100%	1
5OY0_SQD_0_5005	12%	56%	0.232	0.764	0.8	0.89	-	3	0	0	100%	1
5OY0_SQD_B_5008	11%	55%	0.323	0.836	0.8	0.91	-	3	0	0	100%	1
5OY0_SQD_b_5006	4%	56%	0.324	0.717	0.79	0.9	-	3	0	0	100%	1
5OY0_SQD_f_5001	4%	56%	0.364	0.75	0.79	0.9	-	2	0	0	100%	1
5OY0_SQD_F_5001	4%	55%	0.417	0.793	0.8	0.92	-	2	0	0	100%	1
6HQB_SQD_F_5001	1%	55%	0.584	0.791	0.79	0.92	-	2	2	0	100%	1
5V2C_SQD_a_413	94%	24%	0.075	0.976	1.12	2.14	4	12	0	0	100%	1
6DHE_SQD_A_412	77%	23%	0.113	0.961	1.05	2.27	5	14	0	0	96%	0.963
8IRC_SQD_a_411	77%	32%	0.119	0.96	0.96	1.83	3	13	0	0	100%	1
8IR5_SQD_a_411	75%	33%	0.123	0.958	0.95	1.77	3	13	0	0	100%	1
8IRF_SQD_a_410	75%	32%	0.125	0.96	0.96	1.83	3	13	0	0	100%	0.49

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.