GDD: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE
GDD is a Ligand Of Interest in 5OGK designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5OGK_GDD_E_401 | 41% | 38% | 0.159 | 0.874 | 0.79 | 1.68 | 1 | 5 | 4 | 0 | 100% | 0.9 |
| 5OGK_GDD_A_401 | 33% | 36% | 0.168 | 0.845 | 0.82 | 1.75 | 1 | 7 | 0 | 0 | 100% | 0.9 |
| 5OGK_GDD_D_401 | 23% | 38% | 0.219 | 0.84 | 0.8 | 1.69 | 1 | 5 | 1 | 0 | 100% | 0.77 |
| 8SG0_GDD_A_404 | 98% | 37% | 0.062 | 0.985 | 0.97 | 1.59 | 2 | 8 | 3 | 0 | 100% | 0.57 |
| 6GPK_GDD_C_408 | 98% | 32% | 0.064 | 0.984 | 1.04 | 1.75 | 2 | 5 | 0 | 0 | 100% | 1 |
| 2C5E_GDD_B_1372 | 98% | 43% | 0.069 | 0.988 | 1.07 | 1.17 | 2 | 4 | 1 | 0 | 100% | 1 |
| 2PK3_GDD_B_411 | 93% | 40% | 0.079 | 0.974 | 1.2 | 1.18 | 1 | 6 | 0 | 0 | 100% | 1 |
| 2C59_GDD_A_1377 | 87% | 43% | 0.108 | 0.982 | 0.91 | 1.35 | 1 | 7 | 1 | 0 | 100% | 0.5 |
