DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
DUP is a Ligand Of Interest in 5MYD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5MYD_DUP_B_201 | 58% | 18% | 0.154 | 0.933 | 2.64 | 1.11 | 5 | 2 | 0 | 0 | 100% | 1 |
| 5MYD_DUP_A_201 | 42% | 19% | 0.148 | 0.867 | 2.69 | 1 | 6 | - | 0 | 0 | 100% | 1 |
| 5MYD_DUP_D_201 | 35% | 19% | 0.193 | 0.88 | 2.63 | 1.04 | 5 | 2 | 0 | 0 | 100% | 1 |
| 5MYD_DUP_C_201 | 34% | 18% | 0.204 | 0.887 | 2.47 | 1.23 | 5 | 3 | 0 | 0 | 100% | 1 |
| 3LOJ_DUP_A_201 | 100% | 19% | 0.029 | 0.995 | 2.23 | 1.42 | 9 | 4 | 2 | 0 | 100% | 1 |
| 3HZA_DUP_A_201 | 100% | 22% | 0.036 | 0.995 | 2.01 | 1.4 | 6 | 8 | 1 | 0 | 100% | 1 |
| 5ECT_DUP_A_201 | 100% | 27% | 0.04 | 0.994 | 1.82 | 1.3 | 7 | 4 | 1 | 0 | 100% | 1 |
| 3EHW_DUP_C_777 | 100% | 27% | 0.039 | 0.991 | 1.72 | 1.37 | 4 | 4 | 4 | 0 | 100% | 1 |
| 1SIX_DUP_A_170 | 100% | 18% | 0.046 | 0.995 | 2.25 | 1.49 | 7 | 4 | 0 | 0 | 100% | 1 |
