Ligand validation:5MX2

SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 5MX2 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5MX2_SQD_a_410	55%	38%	0.147	0.915	1.13	1.37	4	11	0	0	100%	1
5MX2_SQD_A_409	51%	33%	0.148	0.902	1.12	1.65	4	11	0	0	100%	1
5MX2_SQD_a_412	34%	47%	0.16	0.855	0.89	1.17	2	6	0	0	93%	0.9259
5MX2_SQD_f_102	29%	29%	0.228	0.922	1.27	1.68	4	10	0	0	80%	0.7963
5MX2_SQD_L_101	25%	7%	0.166	0.82	1.22	3.78	4	10	0	0	89%	0.8889
5MX2_SQD_D_412	25%	27%	0.211	0.881	1.27	1.8	4	10	0	0	80%	0.7963
5MX2_SQD_b_601	23%	35%	0.18	0.803	1.14	1.53	4	13	0	0	100%	1
5MX2_SQD_A_411	18%	38%	0.197	0.786	1.14	1.34	4	8	0	0	100%	1
5V2C_SQD_a_413	94%	24%	0.075	0.976	1.12	2.14	4	12	0	0	100%	1
6DHE_SQD_A_412	77%	23%	0.113	0.961	1.05	2.27	5	14	0	0	96%	0.963
8IRC_SQD_a_411	77%	32%	0.119	0.96	0.96	1.83	3	13	0	0	100%	1
8IR5_SQD_a_411	75%	33%	0.123	0.958	0.95	1.77	3	13	0	0	100%	1
8IRF_SQD_a_410	75%	32%	0.125	0.96	0.96	1.83	3	13	0	0	100%	0.49
8IR8_SQD_a_409	75%	33%	0.126	0.96	0.95	1.77	3	13	0	0	100%	0.4

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.