Ligand validation:5JDM

MYS: PENTADECANE

MYS is a Ligand Of Interest in 5JDM designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5JDM_MYS_A_407	6%	75%	0.182	0.717	0.36	0.59	-	-	0	0	40%	0.4
5JDM_MYS_A_409	5%	70%	0.302	0.759	0.36	0.76	-	-	0	0	67%	0.6667
5JDM_MYS_A_414	4%	65%	0.34	0.753	0.36	0.94	-	-	1	0	87%	0.8667
5JDM_MYS_A_410	3%	76%	0.381	0.834	0.34	0.58	-	-	0	0	40%	0.4
5JDM_MYS_A_411	3%	78%	0.374	0.819	0.37	0.52	-	-	0	0	33%	0.3333
5JDM_MYS_A_406	1%	69%	0.439	0.682	0.47	0.7	-	-	0	0	73%	0.7333
5JDM_MYS_A_412	1%	67%	0.595	0.766	0.5	0.73	-	-	0	0	73%	0.7333
5JDM_MYS_A_413	0%	65%	0.529	0.517	0.35	0.96	-	-	2	0	100%	1
5JDM_MYS_A_408	0%	69%	0.508	0.481	0.44	0.74	-	-	1	0	27%	0.2667
3V5U_MYS_A_714	31%	66%	0.156	0.858	0.41	0.88	-	-	1	0	80%	0.8
5JDG_MYS_A_423	26%	69%	0.154	0.927	0.44	0.73	-	-	0	0	27%	0.2667
5HXE_MYS_A_410	24%	68%	0.183	0.81	0.37	0.83	-	-	0	0	100%	1
5HWY_MYS_A_414	23%	69%	0.157	0.911	0.43	0.74	-	-	0	0	27%	0.2667
5JDH_MYS_A_415	22%	69%	0.156	0.9	0.44	0.73	-	-	0	0	27%	0.2667
6LPK_MYS_A_2409	54%	84%	0.13	0.896	0.25	0.5	-	-	0	0	100%	1
6LPJ_MYS_A_2426	53%	78%	0.13	0.89	0.2	0.68	-	-	0	0	100%	1
4QND_MYS_A_101	44%	93%	0.13	0.868	0.08	0.41	-	-	1	0	93%	0.9333
5H2K_MYS_A_606	25%	71%	0.185	0.822	0.3	0.78	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.