Ligand validation:5GY2

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5GY2 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5GY2_NAG_B_802	45%	47%	0.151	0.884	0.62	1.44	-	2	0	0	100%	0.9333
5GY2_NAG_A_801	15%	46%	0.255	0.814	0.66	1.42	-	3	3	0	100%	0.9333
5GY2_NAG_B_801	7%	55%	0.223	0.683	0.35	1.34	-	2	0	0	100%	0.9333
5GY2_NAG_A_802	7%	42%	0.311	0.763	0.59	1.71	-	4	0	0	100%	0.9333
5GY2_NAG_B_803	3%	40%	0.378	0.696	0.96	1.45	1	2	0	0	100%	0.9333
5GY2_NAG_A_803	1%	46%	0.448	0.667	0.78	1.32	-	2	0	0	100%	0.9333
6BXA_NAG_B_802	64%	67%	0.105	0.905	0.59	0.65	-	-	0	0	100%	0.9333
6BXC_NAG_A_902	57%	73%	0.136	0.913	0.45	0.56	-	-	0	0	100%	0.9333
3V47_NAG_A_901	35%	33%	0.164	0.851	0.57	2.16	-	3	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.