VDP: (3R,5S)-5-[(2R)-2-[(1R,3aS,4E,7aR)-7a-methyl-4-[(2Z)-2-[(3S,5R)-2-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]propyl]-3-methyl-3-oxidanyl-1-(4-phenylbutyl)pyrrolidin-2-one
VDP is a Ligand Of Interest in 5GIE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5GIE_VDP_A_501 | 41% | 34% | 0.189 | 0.906 | 0.64 | 2.04 | 1 | 16 | 0 | 0 | 100% | 1 |
| 5GIE_VDP_D_501 | 15% | 33% | 0.281 | 0.846 | 0.67 | 2.08 | 2 | 11 | 0 | 0 | 100% | 1 |
| 5GID_VDP_A_501 | 34% | 29% | 0.204 | 0.89 | 0.61 | 2.34 | 1 | 17 | 1 | 0 | 100% | 1 |
