0O2: guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
0O2 is a Ligand Of Interest in 5DED designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5DED_0O2_A_301 | 77% | 4% | 0.118 | 0.959 | 3.43 | 2.63 | 12 | 18 | 3 | 4 | 100% | 1 |
5DED_0O2_A_302 | 75% | 3% | 0.142 | 0.978 | 3.41 | 2.87 | 10 | 17 | 2 | 4 | 100% | 1 |
5DED_0O2_H_301 | 74% | 4% | 0.118 | 0.948 | 3.42 | 2.44 | 12 | 16 | 2 | 4 | 100% | 1 |
5DED_0O2_D_302 | 73% | 4% | 0.15 | 0.977 | 3.45 | 2.46 | 11 | 13 | 1 | 4 | 100% | 1 |
5DED_0O2_B_301 | 69% | 4% | 0.131 | 0.947 | 3.41 | 2.43 | 11 | 15 | 4 | 3 | 100% | 1 |
5DED_0O2_D_301 | 68% | 4% | 0.127 | 0.939 | 3.24 | 2.5 | 10 | 15 | 3 | 4 | 100% | 1 |
5DED_0O2_H_302 | 66% | 5% | 0.159 | 0.966 | 3.17 | 2.46 | 11 | 16 | 0 | 4 | 100% | 1 |
5DED_0O2_G_301 | 66% | 4% | 0.132 | 0.938 | 3.46 | 2.49 | 11 | 16 | 1 | 4 | 100% | 1 |
5DED_0O2_C_301 | 64% | 4% | 0.128 | 0.927 | 3.37 | 2.49 | 10 | 17 | 4 | 4 | 100% | 1 |
5DED_0O2_F_301 | 53% | 5% | 0.149 | 0.911 | 3.21 | 2.44 | 9 | 18 | 4 | 4 | 100% | 1 |
5DED_0O2_E_301 | 50% | 4% | 0.158 | 0.908 | 3.32 | 2.42 | 11 | 18 | 1 | 4 | 100% | 1 |
5DED_0O2_G_302 | 38% | 6% | 0.213 | 0.914 | 2.85 | 2.42 | 8 | 17 | 1 | 4 | 100% | 1 |
4QRH_0O2_C_304 | 83% | 28% | 0.092 | 0.952 | 1.8 | 1.26 | 7 | 7 | 0 | 0 | 100% | 1 |
7O9H_0O2_A_601 | 69% | 40% | 0.12 | 0.934 | 1.23 | 1.15 | 1 | 3 | 0 | 0 | 100% | 1 |
6GFM_0O2_A_501 | 63% | 8% | 0.128 | 0.924 | 3.07 | 1.72 | 12 | 15 | 1 | 0 | 100% | 1 |
4EDV_0O2_A_502 | 60% | 16% | 0.142 | 0.928 | 2.33 | 1.53 | 8 | 11 | 0 | 0 | 100% | 1 |
6EX0_0O2_B_301 | 58% | 5% | 0.124 | 0.903 | 3.5 | 1.94 | 16 | 15 | 1 | 0 | 100% | 1 |