GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4Z87 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4Z87_GDP_D_602 91% 43% 0.088 0.9730.96 1.31 1 430100%1
4Z87_GDP_C_603 82% 40% 0.099 0.9541.06 1.31 1 410100%1
4Z87_GDP_B_602 75% 45% 0.125 0.9590.97 1.17 1 200100%1
4Z87_GDP_A_603 75% 45% 0.131 0.9640.98 1.17 1 340100%1
4Z87_GDP_B_603 72% 41% 0.134 0.9590.94 1.39 1 510100%1
4Z87_GDP_A_602 71% 43% 0.126 0.9480.95 1.3 1 400100%1
4Z87_GDP_C_602 68% 42% 0.114 0.9271.08 1.2 1 300100%1
4Z87_GDP_D_601 65% 41% 0.113 0.9161.05 1.28 1 320100%1
4Z87_GDP_A_604 46% 40% 0.147 0.8811.05 1.34 1 530100%0.51
4Z87_GDP_D_603 35% 41% 0.14 0.8261.07 1.29 1 410100%0.55
4Z87_GDP_B_604 31% 41% 0.149 0.8150.98 1.34 1 410100%1
4Z87_GDP_C_604 7% 43% 0.279 0.7311.02 1.22 1 210100%1
5TC3_GDP_A_602 63% 8% 0.15 0.9452.89 1.93 10 810100%1
6RPU_GDP_A_602 21% 27% 0.205 0.8131.11 1.96 2 830100%1
1RRG_GDP_A_183 100% 19% 0.036 0.9972.05 1.56 7 300100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1
8CNJ_GDP_B_201 100% 56% 0.04 0.9920.91 0.77 1 -00100%1
5UQW_GDP_A_1002 100% 47% 0.04 0.991.04 1.01 2 200100%1
2PHN_GDP_A_2696 100% 45% 0.046 0.991.08 1.08 1 200100%1