Ligand validation:4YK4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4YK4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YK4_NAG_A_302	12%	48%	0.275	0.804	0.79	1.23	-	1	2	0	100%	0.9333
4YK4_NAG_E_303	11%	77%	0.284	0.805	0.3	0.61	-	-	0	0	100%	0.9333
4YK4_NAG_A_301	7%	71%	0.334	0.792	0.36	0.73	-	-	0	1	100%	0.9333
4YK4_NAG_E_301	7%	42%	0.265	0.72	0.52	1.76	-	4	1	1	100%	0.9333
4YK4_NAG_E_302	5%	77%	0.381	0.786	0.29	0.62	-	-	6	0	100%	0.9333
4YK4_NAG_A_303	3%	77%	0.372	0.684	0.3	0.61	-	-	1	0	100%	0.9333
4YJZ_NAG_E_302	9%	76%	0.296	0.791	0.3	0.62	-	-	9	0	100%	0.9333
6Q0O_NAG_A_304	4%	89%	0.392	0.787	0.24	0.41	-	-	0	0	100%	0.9333
4HKX_NAG_E_301	4%	77%	0.28	0.661	0.29	0.6	-	-	1	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.