Ligand validation:4RKU

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4RKU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4RKU_CLA_B_9010	53%	9%	0.194	0.956	2.17	2.45	14	21	14	3	100%	1
4RKU_CLA_B_1235	50%	10%	0.193	0.946	2.32	2.18	16	15	7	3	100%	1
4RKU_CLA_B_1205	49%	9%	0.2	0.947	2.33	2.25	15	16	4	3	100%	1
4RKU_CLA_B_1203	48%	9%	0.194	0.951	2.44	2.21	16	15	2	2	92%	0.9231
4RKU_CLA_B_1228	48%	7%	0.168	0.949	2.41	2.57	15	17	4	3	78%	0.7846
4RKU_CLA_B_1207	46%	9%	0.193	0.929	2.33	2.3	15	17	13	3	100%	1
4RKU_CLA_1_1004	44%	11%	0.186	0.916	2.15	2.28	17	16	24	3	100%	1
4RKU_CLA_B_1226	44%	9%	0.219	0.949	2.12	2.52	14	15	3	3	100%	1
4RKU_CLA_A_1101	44%	10%	0.2	0.929	2.34	2.22	15	15	5	2	100%	1
4RKU_CLA_B_1229	43%	10%	0.217	0.941	2.35	2.14	16	15	8	3	100%	1
4RKU_CLA_B_1204	43%	8%	0.191	0.942	2.57	2.31	16	17	3	3	85%	0.8462
4RKU_CLA_4_4003	43%	11%	0.171	0.893	2.16	2.17	15	19	28	3	100%	1
4RKU_CLA_B_1220	42%	10%	0.222	0.945	2.34	2.15	16	16	8	3	100%	1
4RKU_CLA_A_1132	42%	11%	0.212	0.933	2.2	2.19	16	17	13	3	100%	1
4RKU_CLA_B_1227	41%	10%	0.206	0.924	2.07	2.45	13	18	24	3	100%	1
4RKU_CLA_B_1202	41%	10%	0.223	0.939	2.34	2.17	15	14	2	3	100%	1
4RKU_CLA_4_4012	40%	10%	0.214	0.928	2.14	2.36	14	17	18	3	100%	1
4RKU_CLA_A_1140	40%	10%	0.221	0.932	2.36	2.18	15	15	4	3	100%	1
4RKU_CLA_A_1139	38%	10%	0.209	0.914	2.35	2.14	16	16	1	3	100%	1
4RKU_CLA_B_1209	38%	6%	0.175	0.93	2.89	2.33	16	13	5	3	71%	0.7077
4RKU_CLA_B_1225	38%	10%	0.229	0.932	2.35	2.15	15	16	6	3	100%	1
4RKU_CLA_A_1102	37%	6%	0.19	0.932	2.71	2.58	16	15	6	3	77%	0.7692
4RKU_CLA_4_4015	37%	7%	0.169	0.921	2.64	2.34	15	16	13	3	71%	0.7077
4RKU_CLA_B_1201	37%	6%	0.201	0.952	2.9	2.34	16	14	1	3	71%	0.7077
4RKU_CLA_4_4013	36%	6%	0.182	0.915	2.41	2.72	15	18	13	3	78%	0.7846
4RKU_CLA_A_1138	36%	10%	0.232	0.926	2.34	2.15	16	16	9	3	100%	1
4RKU_CLA_B_1218	36%	9%	0.199	0.905	2.44	2.29	15	16	2	3	92%	0.9231
4RKU_CLA_1_1005	35%	8%	0.205	0.921	2.3	2.48	15	17	14	3	86%	0.8615
4RKU_CLA_B_1217	35%	6%	0.187	0.928	2.89	2.32	15	13	5	3	71%	0.7077
4RKU_CLA_A_1128	35%	10%	0.241	0.93	2.27	2.22	14	18	11	3	100%	1
4RKU_CLA_B_1239	34%	9%	0.242	0.926	2.14	2.51	14	22	7	3	100%	1
4RKU_CLA_A_1106	34%	9%	0.245	0.929	2.34	2.24	15	16	9	3	100%	1
4RKU_CLA_B_9022	33%	8%	0.246	0.928	2.25	2.54	14	24	8	3	100%	1
4RKU_CLA_B_1211	33%	10%	0.226	0.907	2.34	2.22	15	16	3	3	100%	1
4RKU_CLA_B_1238	33%	10%	0.243	0.924	2.35	2.18	16	16	3	3	100%	1
4RKU_CLA_2_2011	33%	8%	0.172	0.864	2.26	2.62	15	18	11	3	92%	0.9231
4RKU_CLA_1_1003	32%	9%	0.191	0.865	2.17	2.44	15	21	42	3	100%	1
4RKU_CLA_L_1502	32%	10%	0.227	0.901	2.28	2.2	15	15	7	3	100%	1
4RKU_CLA_2_2012	32%	11%	0.236	0.91	2.12	2.19	15	17	21	3	100%	1
4RKU_CLA_B_1208	32%	8%	0.212	0.913	2.58	2.32	16	14	5	3	85%	0.8462
4RKU_CLA_4_4009	31%	7%	0.203	0.916	2.38	2.67	15	15	9	3	77%	0.7692
4RKU_CLA_B_1221	31%	6%	0.224	0.924	2.6	2.57	15	18	6	3	83%	0.8308
4RKU_CLA_A_1130	30%	6%	0.212	0.929	2.84	2.33	15	13	17	3	71%	0.7077
4RKU_CLA_B_1206	30%	10%	0.266	0.931	2.31	2.26	15	19	13	3	100%	1
4RKU_CLA_A_9013	29%	9%	0.246	0.908	2.2	2.48	13	24	9	3	100%	1
4RKU_CLA_B_1216	29%	11%	0.241	0.9	2.32	2.11	15	17	3	3	100%	1
4RKU_CLA_B_1210	29%	9%	0.243	0.902	2.38	2.22	16	17	6	3	100%	1
4RKU_CLA_B_1230	28%	8%	0.229	0.904	2.46	2.38	15	17	4	3	89%	0.8923
4RKU_CLA_A_1105	28%	6%	0.222	0.916	2.69	2.45	16	15	2	3	78%	0.7846
4RKU_CLA_F_1301	28%	6%	0.2	0.907	2.86	2.31	14	10	2	3	69%	0.6923
4RKU_CLA_4_4011	28%	11%	0.261	0.914	2.06	2.35	15	16	6	3	100%	1
4RKU_CLA_A_1103	28%	10%	0.253	0.905	2.33	2.16	15	17	5	2	100%	1
4RKU_CLA_A_1131	28%	10%	0.291	0.944	2.16	2.31	16	19	4	3	100%	1
4RKU_CLA_1_1012	27%	7%	0.213	0.903	2.44	2.65	14	20	23	3	77%	0.7692
4RKU_CLA_2_2001	27%	2%	0.149	0.901	3.27	3.62	15	15	19	3	42%	0.4154
4RKU_CLA_4_4008	27%	4%	0.163	0.855	2.51	3.45	14	22	16	3	74%	0.7385
4RKU_CLA_B_1213	27%	9%	0.223	0.883	2.25	2.36	15	18	10	3	92%	0.9231
4RKU_CLA_A_1122	26%	8%	0.227	0.888	2.47	2.34	16	15	5	3	91%	0.9077
4RKU_CLA_A_9012	26%	9%	0.261	0.905	2.18	2.51	15	21	17	3	100%	1
4RKU_CLA_A_1104	26%	10%	0.275	0.919	2.33	2.17	15	15	5	2	100%	1
4RKU_CLA_B_1223	26%	10%	0.279	0.921	2.33	2.23	15	16	4	2	100%	1
4RKU_CLA_B_9023	25%	11%	0.284	0.924	2.17	2.26	15	21	7	3	100%	1
4RKU_CLA_B_1236	25%	8%	0.256	0.923	2.55	2.34	16	15	4	2	85%	0.8462
4RKU_CLA_B_1219	25%	9%	0.228	0.878	2.43	2.2	16	17	5	3	92%	0.9231
4RKU_CLA_1_1001	25%	6%	0.241	0.904	2.39	2.73	14	21	70	3	85%	0.8462
4RKU_CLA_2_2004	24%	8%	0.226	0.874	2.32	2.48	17	13	30	3	91%	0.9077
4RKU_CLA_F_1303	24%	11%	0.281	0.914	2.19	2.18	14	19	12	3	98%	0.9846
4RKU_CLA_1_1008	23%	12%	0.271	0.893	2.09	2.19	16	17	7	3	100%	1
4RKU_CLA_B_1224	22%	10%	0.287	0.903	2.34	2.18	15	15	5	2	100%	1
4RKU_CLA_2_2013	22%	10%	0.259	0.874	2.09	2.4	15	20	12	3	100%	1
4RKU_CLA_A_1125	22%	7%	0.243	0.885	2.33	2.74	14	18	15	3	85%	0.8462
4RKU_CLA_B_1240	21%	9%	0.29	0.904	2.14	2.47	15	25	16	3	100%	1
4RKU_CLA_B_1237	21%	9%	0.272	0.898	2.43	2.28	15	15	0	3	92%	0.9231
4RKU_CLA_L_1503	20%	6%	0.227	0.872	2.65	2.54	15	16	11	3	77%	0.7692
4RKU_CLA_A_1115	20%	8%	0.237	0.864	2.55	2.27	16	15	5	3	86%	0.8615
4RKU_CLA_A_1136	20%	10%	0.262	0.864	2.34	2.21	15	17	5	3	100%	1
4RKU_CLA_4_4010	19%	6%	0.233	0.871	2.48	2.72	14	19	8	3	77%	0.7692
4RKU_CLA_A_1111	19%	8%	0.268	0.877	2.44	2.36	15	16	5	2	92%	0.9231
4RKU_CLA_1_1011	19%	9%	0.277	0.871	2.07	2.59	14	21	10	3	100%	1
4RKU_CLA_B_1222	19%	10%	0.296	0.889	2.35	2.16	16	17	6	3	100%	1
4RKU_CLA_B_1231	18%	6%	0.237	0.878	2.89	2.35	15	15	3	3	71%	0.7077
4RKU_CLA_A_1116	18%	7%	0.26	0.876	2.59	2.34	16	15	2	2	83%	0.8308
4RKU_CLA_A_1119	18%	10%	0.283	0.868	2.34	2.11	15	15	3	3	100%	1
4RKU_CLA_A_1108	16%	6%	0.223	0.849	2.91	2.29	15	13	4	3	71%	0.7077
4RKU_CLA_B_1234	16%	9%	0.289	0.877	2.46	2.24	16	15	6	2	92%	0.9231
4RKU_CLA_2_2005	16%	11%	0.323	0.896	2.07	2.34	15	18	19	3	100%	1
4RKU_CLA_A_1118	16%	5%	0.258	0.878	2.84	2.56	15	15	4	3	71%	0.7077
4RKU_CLA_A_1109	16%	10%	0.308	0.876	2.34	2.21	15	17	6	3	100%	1
4RKU_CLA_4_4004	16%	10%	0.312	0.88	2.11	2.4	17	19	35	3	100%	1
4RKU_CLA_A_1121	16%	6%	0.238	0.856	2.88	2.45	16	12	1	3	71%	0.7077
4RKU_CLA_A_1127	15%	10%	0.346	0.914	2.34	2.17	16	15	4	3	100%	1
4RKU_CLA_A_1137	15%	7%	0.321	0.916	2.55	2.39	15	17	7	3	85%	0.8462
4RKU_CLA_A_1129	15%	6%	0.254	0.859	2.64	2.49	14	15	19	3	77%	0.7692
4RKU_CLA_3_3012	15%	4%	0.178	0.791	2.65	3.17	15	18	21	3	69%	0.6923
4RKU_CLA_G_1001	15%	6%	0.304	0.89	2.33	2.91	15	19	7	3	85%	0.8462
4RKU_CLA_A_1141	14%	7%	0.285	0.878	2.7	2.36	16	15	3	3	78%	0.7846
4RKU_CLA_A_1123	14%	9%	0.298	0.852	2.36	2.25	16	17	5	2	100%	1
4RKU_CLA_A_1124	14%	7%	0.3	0.882	2.58	2.35	15	16	9	3	85%	0.8462
4RKU_CLA_B_1214	14%	8%	0.329	0.9	2.46	2.34	16	17	5	2	91%	0.9077
4RKU_CLA_A_1135	14%	6%	0.288	0.876	2.67	2.54	15	17	5	1	78%	0.7846
4RKU_CLA_G_1002	13%	5%	0.249	0.846	2.65	2.77	14	17	32	3	71%	0.7077
4RKU_CLA_A_1114	13%	6%	0.292	0.89	2.93	2.33	16	12	1	2	71%	0.7077
4RKU_CLA_1_1002	13%	7%	0.309	0.875	2.4	2.6	14	20	45	3	86%	0.8615
4RKU_CLA_A_1117	13%	10%	0.39	0.93	2.35	2.14	15	17	4	3	100%	1
4RKU_CLA_A_1107	12%	6%	0.279	0.853	2.7	2.55	16	21	6	3	78%	0.7846
4RKU_CLA_F_1302	12%	6%	0.316	0.899	2.91	2.29	16	12	3	2	71%	0.7077
4RKU_CLA_A_1133	12%	6%	0.268	0.849	2.7	2.59	15	16	4	3	71%	0.7077
4RKU_CLA_A_1126	11%	10%	0.355	0.881	2.33	2.16	16	18	13	2	100%	1
4RKU_CLA_B_1215	11%	9%	0.353	0.883	2.44	2.21	15	16	2	3	92%	0.9231
4RKU_CLA_1_1009	10%	8%	0.281	0.791	2.18	2.64	15	22	52	3	100%	1
4RKU_CLA_1_1007	10%	8%	0.367	0.907	2.36	2.39	16	18	18	3	85%	0.8462
4RKU_CLA_L_1501	10%	6%	0.365	0.93	2.83	2.41	15	13	19	3	71%	0.7077
4RKU_CLA_4_4002	10%	6%	0.314	0.846	2.32	2.97	15	20	35	3	86%	0.8615
4RKU_CLA_A_1134	10%	6%	0.298	0.853	2.91	2.33	16	12	0	3	71%	0.7077
4RKU_CLA_2_2010	10%	11%	0.299	0.801	2.18	2.21	16	17	9	3	100%	1
4RKU_CLA_A_1113	10%	6%	0.298	0.85	2.91	2.33	15	12	1	2	71%	0.7077
4RKU_CLA_3_3009	9%	5%	0.264	0.805	2.79	2.77	15	18	6	3	71%	0.7077
4RKU_CLA_2_2002	8%	8%	0.322	0.814	2.26	2.53	16	17	35	3	92%	0.9231
4RKU_CLA_3_3008	8%	10%	0.255	0.719	2.17	2.39	15	17	5	3	100%	1
4RKU_CLA_2_2009	7%	6%	0.303	0.814	2.76	2.41	16	15	19	3	71%	0.7077
4RKU_CLA_2_2007	6%	8%	0.357	0.831	2.34	2.47	15	20	6	3	85%	0.8462
4RKU_CLA_4_4014	6%	5%	0.345	0.831	2.71	2.71	15	18	21	3	69%	0.6923
4RKU_CLA_H_1000	6%	6%	0.406	0.885	2.87	2.39	15	14	4	2	71%	0.7077
4RKU_CLA_3_3013	6%	5%	0.262	0.725	2.61	2.78	16	18	7	3	77%	0.7692
4RKU_CLA_A_1112	5%	6%	0.366	0.839	2.91	2.32	16	13	3	3	71%	0.7077
4RKU_CLA_2_2014	5%	4%	0.233	0.701	2.67	3.03	14	17	12	3	69%	0.6923
4RKU_CLA_3_3011	4%	6%	0.308	0.751	2.76	2.45	15	14	20	3	71%	0.7077
4RKU_CLA_J_1302	4%	9%	0.331	0.71	2.45	2.26	15	16	1	2	94%	0.9385
4RKU_CLA_J_6014	3%	9%	0.252	0.607	2.44	2.24	16	15	1	3	94%	0.9385
4RKU_CLA_1_1010	3%	11%	0.407	0.746	2.14	2.21	15	15	7	3	100%	1
4RKU_CLA_3_3010	3%	6%	0.309	0.676	2.48	2.66	14	21	6	3	80%	0.8
4RKU_CLA_A_1110	3%	8%	0.372	0.731	2.53	2.35	15	17	2	3	85%	0.8462
4RKU_CLA_2_2003	3%	9%	0.292	0.616	2.22	2.43	17	18	19	3	100%	1
4RKU_CLA_B_1212	3%	6%	0.493	0.868	2.91	2.34	15	14	2	3	71%	0.7077
4RKU_CLA_3_3001	2%	10%	0.38	0.662	2.3	2.21	16	17	21	3	100%	1
4RKU_CLA_3_3005	2%	6%	0.367	0.659	2.89	2.41	15	13	4	2	69%	0.6923
4RKU_CLA_4_4001	1%	9%	0.563	0.801	2.18	2.4	16	19	47	3	100%	1
4RKU_CLA_2_2006	1%	8%	0.302	0.536	2.43	2.4	15	16	16	3	88%	0.8769
4RKU_CLA_4_4006	1%	8%	0.331	0.535	2.1	2.69	14	25	15	3	100%	1
4RKU_CLA_A_1120	1%	6%	0.516	0.763	2.91	2.3	15	12	2	3	71%	0.7077
4RKU_CLA_A_1142	1%	6%	0.311	0.552	2.84	2.48	13	12	0	3	68%	0.6769
4RKU_CLA_3_3002	1%	7%	0.52	0.731	2.58	2.47	15	17	1	2	85%	0.8462
4RKU_CLA_4_4007	1%	10%	0.385	0.562	2.19	2.28	15	13	8	3	100%	1
4RKU_CLA_4_4005	1%	4%	0.324	0.553	2.63	3.26	14	18	38	3	69%	0.6923
4RKU_CLA_J_6015	1%	7%	0.306	0.487	2.49	2.51	16	17	7	3	85%	0.8462
4RKU_CLA_2_2008	1%	10%	0.474	0.597	2.25	2.32	15	19	10	3	100%	1
4RKU_CLA_3_3017	0%	6%	0.487	0.571	2.85	2.46	14	12	5	3	69%	0.6923
4RKU_CLA_3_3003	0%	9%	0.578	0.616	2.43	2.22	15	17	10	3	92%	0.9231
4RKU_CLA_3_3006	0%	10%	0.492	0.511	2.36	2.12	16	15	2	3	100%	1
4RKU_CLA_1_1006	0%	5%	0.509	0.55	2.7	2.8	16	15	56	3	72%	0.7231
4RKU_CLA_1_1013	0%	10%	0.719	0.66	2.18	2.38	15	20	46	3	100%	1
4RKU_CLA_3_3004	0%	6%	0.581	0.534	2.87	2.32	14	10	0	3	69%	0.6923
4RKU_CLA_3_3014	0%	6%	0.664	0.53	2.8	2.57	13	14	4	2	69%	0.6923
4RKU_CLA_1_1014	0%	5%	0.708	0.525	2.73	2.7	14	12	27	3	69%	0.6923
4RKU_CLA_A_1143	0%	6%	0.854	0.524	2.89	2.28	15	11	0	3	71%	0.7077
4RKU_CLA_3_3016	0%	6%	0.804	0.414	2.89	2.38	15	12	0	3	69%	0.6923
4RKU_CLA_3_3015	0%	6%	1.248	0.31	2.89	2.31	15	11	0	3	69%	0.6923
5L8R_CLA_B_832	74%	26%	0.122	0.971	1.36	1.8	5	9	6	3	89%	0.8923
7DKZ_CLA_A_808	72%	29%	0.153	0.977	1.36	1.59	8	11	4	1	100%	1
4XK8_CLA_b_839	59%	13%	0.179	0.963	2.05	2.07	13	17	0	3	100%	1
6ZXS_CLA_1_5012	58%	17%	0.12	0.952	1.62	2.11	9	13	2	1	71%	0.7077
4Y28_CLA_B_1203	47%	10%	0.221	0.964	2.29	2.15	15	15	3	2	100%	1
5V2C_CLA_B_604	99%	16%	0.049	0.986	1.64	2.25	13	20	0	1	100%	1
5B66_CLA_D_402	98%	13%	0.061	0.981	1.9	2.23	16	21	0	0	100%	1
7YQ7_CLA_D_401	98%	9%	0.059	0.979	2.09	2.56	19	28	0	0	100%	1
8OV5_CLA_O_601	97%	35%	0.065	0.983	1.45	1.23	8	4	0	0	100%	1
5ZZN_CLA_A_406	97%	17%	0.064	0.979	1.65	2.13	17	21	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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4RKU

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 4RKU designated by the RCSB