Ligand validation:4PC3

GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4PC3 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4PC3_GDP_B_401	51%	60%	0.161	0.916	0.65	0.86	-	-	0	0	100%	1
4PC3_GDP_A_401	11%	55%	0.319	0.836	0.69	1.04	-	1	0	0	100%	0.37
3U6B_GDP_B_401	91%	57%	0.1	0.986	1.05	0.58	2	-	0	0	100%	1
2HCJ_GDP_A_999	88%	53%	0.106	0.982	0.94	0.88	2	3	0	0	100%	1
5MI3_GDP_B_402	83%	45%	0.123	0.982	1.01	1.14	2	3	0	0	100%	1
2HDN_GDP_L_6999	83%	37%	0.12	0.978	1.07	1.46	2	7	0	0	100%	1
5MI8_GDP_A_403	83%	23%	0.12	0.978	1.18	2.15	3	6	0	0	100%	1
1RRG_GDP_A_183	100%	19%	0.036	0.997	2.05	1.56	7	3	0	0	100%	1
5YMX_GDP_A_301	100%	54%	0.038	0.994	0.92	0.85	1	-	2	0	100%	1
8CNJ_GDP_B_201	100%	56%	0.04	0.992	0.91	0.77	1	-	0	0	100%	1
5UQW_GDP_A_1002	100%	47%	0.04	0.99	1.04	1.01	2	2	0	0	100%	1
2PHN_GDP_A_2696	100%	45%	0.046	0.99	1.08	1.08	1	2	0	0	100%	1

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.