SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 4IL6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4IL6_SQD_c_518 | 53% | 41% | 0.144 | 0.904 | 1.04 | 1.3 | 3 | 7 | 0 | 0 | 100% | 1 |
| 4IL6_SQD_A_1011 | 52% | 41% | 0.148 | 0.906 | 1.02 | 1.32 | 3 | 9 | 0 | 0 | 100% | 1 |
| 4IL6_SQD_D_408 | 36% | 32% | 0.18 | 0.91 | 1.17 | 1.61 | 3 | 9 | 0 | 0 | 80% | 0.7963 |
| 4IL6_SQD_a_401 | 33% | 44% | 0.162 | 0.841 | 1.04 | 1.16 | 3 | 5 | 0 | 0 | 100% | 1 |
| 4IL6_SQD_A_1016 | 29% | 44% | 0.166 | 0.823 | 1.04 | 1.16 | 3 | 5 | 0 | 0 | 100% | 1 |
| 4IL6_SQD_B_620 | 14% | 45% | 0.238 | 0.785 | 1.04 | 1.1 | 3 | 7 | 0 | 0 | 100% | 0.5 |
| 4IL6_SQD_b_623 | 10% | 45% | 0.25 | 0.752 | 1.02 | 1.14 | 3 | 7 | 0 | 0 | 100% | 0.5 |
| 4IL6_SQD_f_102 | 8% | 37% | 0.275 | 0.789 | 1.2 | 1.37 | 4 | 7 | 0 | 0 | 80% | 0.7963 |
| 5V2C_SQD_a_413 | 94% | 24% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 77% | 23% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 32% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 75% | 33% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 75% | 32% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 33% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
