Ligand validation:4GDX

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4GDX designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4GDX_NAG_B_1101	83%	75%	0.08	0.939	0.36	0.61	-	-	0	0	100%	0.9333
4GDX_NAG_A_603	53%	87%	0.138	0.899	0.19	0.49	-	-	0	0	100%	0.9333
4GDX_NAG_A_602	43%	84%	0.162	0.887	0.25	0.51	-	-	0	0	100%	0.9333
4GDX_NAG_A_604	14%	58%	0.212	0.762	0.51	1.07	-	1	0	0	100%	0.9333
4GDX_NAG_A_605	13%	78%	0.271	0.814	0.37	0.51	-	-	1	0	100%	0.9333
4GDX_NAG_A_601	13%	72%	0.192	0.732	0.57	0.5	-	-	0	0	100%	0.9333
4ZC6_NAG_B_602	89%	55%	0.08	0.958	0.6	1.1	-	1	0	0	100%	0.9333
6XPB_NAG_B_602	88%	50%	0.07	0.946	0.62	1.3	-	2	1	0	100%	0.9333
7LD9_NAG_B_1101	88%	44%	0.073	0.949	0.67	1.54	-	2	1	0	100%	0.9333
4ZBK_NAG_B_1101	82%	59%	0.103	0.959	0.82	0.73	1	-	1	0	100%	0.9333
4ZCG_NAG_B_1101	79%	40%	0.095	0.94	0.69	1.69	-	4	2	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.