PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 3VSA designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3VSA_PLP_B_400 | 96% | 6% | 0.074 | 0.986 | 2.03 | 3.21 | 2 | 9 | 0 | 0 | 100% | 0.9375 |
3VSA_PLP_A_401 | 92% | 8% | 0.087 | 0.98 | 1.49 | 3.31 | 3 | 11 | 2 | 0 | 100% | 0.9375 |
5B36_PLP_B_401 | 97% | 6% | 0.065 | 0.983 | 1.85 | 3.35 | 5 | 9 | 3 | 0 | 100% | 0.9375 |
3VSD_PLP_B_401 | 85% | 24% | 0.099 | 0.976 | 1.48 | 1.8 | 2 | 5 | 5 | 0 | 94% | 0.9375 |
3VSC_PLP_B_401 | 78% | 6% | 0.132 | 0.988 | 2.14 | 3.13 | 5 | 11 | 0 | 0 | 94% | 0.9375 |
1WKV_PLP_B_400 | 75% | 5% | 0.14 | 0.974 | 3.53 | 2.08 | 7 | 5 | 2 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 32% | 0.039 | 0.989 | 1.43 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 40% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 23% | 0.045 | 0.993 | 1.94 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 17% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
1JF9_PLP_A_500 | 100% | 14% | 0.047 | 0.994 | 1.28 | 2.78 | 1 | 11 | 0 | 0 | 100% | 0.9375 |