GDL: 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone
GDL is a Ligand Of Interest in 3KIF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3KIF_GDL_E_110 | 80% | 11% | 0.113 | 0.962 | 1.62 | 2.7 | 1 | 5 | 1 | 0 | 100% | 1 |
| 3KIF_GDL_I_110 | 66% | 21% | 0.121 | 0.928 | 1.88 | 1.63 | 1 | 3 | 1 | 0 | 100% | 1 |
| 3KIF_GDL_A_110 | 63% | 18% | 0.135 | 0.932 | 1.81 | 1.92 | 1 | 6 | 1 | 0 | 100% | 1 |
| 3KIF_GDL_F_110 | 58% | 21% | 0.174 | 0.956 | 1.77 | 1.68 | 1 | 3 | 1 | 0 | 100% | 1 |
| 3KIF_GDL_J_110 | 45% | 2% | 0.15 | 0.88 | 2.69 | 4.52 | 5 | 11 | 7 | 0 | 100% | 1 |
| 3KIF_GDL_G_110 | 42% | 5% | 0.181 | 0.9 | 2.86 | 2.57 | 3 | 7 | 0 | 0 | 100% | 1 |
| 3KIF_GDL_D_238 | 41% | 8% | 0.16 | 0.873 | 1.99 | 2.74 | 1 | 8 | 4 | 0 | 100% | 1 |
| 3KIF_GDL_D_241 | 25% | 4% | 0.18 | 0.817 | 2.45 | 3.34 | 3 | 6 | 0 | 0 | 100% | 1 |
| 3KIF_GDL_B_110 | 23% | 6% | 0.206 | 0.829 | 2.75 | 2.6 | 2 | 6 | 1 | 0 | 100% | 1 |
| 3KIH_GDL_A_98 | 82% | 23% | 0.096 | 0.95 | 1.93 | 1.45 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1O7A_GDL_B_600 | 80% | 5% | 0.103 | 0.952 | 3.97 | 1.65 | 3 | 3 | 0 | 0 | 100% | 1 |
| 2XSB_GDL_A_1436 | 61% | 22% | 0.15 | 0.94 | 2.07 | 1.37 | 3 | 2 | 0 | 0 | 100% | 1 |
