Ligand validation:2QPM

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2QPM designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2QPM_NAG_A_1601	22%	69%	0.221	0.834	0.46	0.72	-	1	0	0	100%	0.7
2QPM_NAG_A_1608	0%	69%	0.692	0.584	0.48	0.7	-	1	0	0	100%	0.4667
2QKN_NAG_A_1601	70%	72%	0.112	0.93	0.48	0.58	-	-	0	0	100%	0.7
3KJM_NAG_A_701	35%	66%	0.2	0.89	0.53	0.76	-	-	0	0	100%	0.9333
1W1R_NAG_A_1537	35%	69%	0.204	0.893	0.49	0.69	-	-	0	0	100%	0.9333
3DQ0_NAG_A_701	33%	63%	0.192	0.872	0.56	0.83	-	1	0	0	100%	0.9333
3S1F_NAG_A_602	33%	39%	0.192	0.872	1.25	1.18	2	1	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.