Ligand validation:2GBC

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2GBC designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2GBC_NAG_A_1319	23%	46%	0.256	0.879	0.65	1.45	-	1	0	0	100%	0.9333
2GBC_NAG_A_1227	18%	57%	0.307	0.898	0.64	1	-	1	3	1	100%	0.9333
2GBC_NAG_B_1319	14%	40%	0.296	0.851	0.74	1.66	-	3	0	0	100%	0.9333
2GBC_NAG_B_1227	8%	57%	0.349	0.829	0.63	1.01	-	1	2	1	100%	0.9333
2GBC_NAG_A_1083	6%	60%	0.275	0.709	0.77	0.74	-	-	0	0	100%	0.9333
2GBC_NAG_A_1521	6%	56%	0.328	0.756	0.69	0.98	-	1	0	0	100%	0.9333
2GBC_NAG_B_1090	5%	59%	0.356	0.759	0.84	0.73	1	-	0	0	100%	0.9333
2GBC_NAG_A_1090	4%	37%	0.306	0.694	1.29	1.26	2	1	0	1	100%	0.9333
2GBC_NAG_B_1083	4%	52%	0.335	0.698	1.1	0.78	1	-	0	1	100%	0.9333
2GBC_NAG_B_1521	3%	66%	0.402	0.744	0.55	0.75	-	-	0	0	100%	0.9333
5VTA_NAG_D_801	82%	50%	0.099	0.955	0.45	1.45	-	1	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.