PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 2COG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2COG_PLP_B_410 | 75% | 38% | 0.114 | 0.949 | 1.07 | 1.44 | 1 | 5 | 1 | 0 | 100% | 0.9375 |
2COG_PLP_A_410 | 73% | 19% | 0.111 | 0.939 | 1.51 | 2.11 | 2 | 5 | 1 | 0 | 100% | 0.9375 |
7NY9_PLP_B_402 | 97% | 51% | 0.067 | 0.98 | 0.81 | 1.08 | 1 | 1 | 1 | 0 | 100% | 0.9375 |
7NXN_PLP_B_402 | 93% | 38% | 0.082 | 0.977 | 0.81 | 1.68 | 1 | 5 | 1 | 0 | 100% | 0.9375 |
7NXO_PLP_B_402 | 93% | 43% | 0.081 | 0.975 | 0.76 | 1.46 | 1 | 3 | 0 | 0 | 100% | 0.9375 |
2ABJ_PLP_J_420 | 87% | 41% | 0.109 | 0.983 | 1.05 | 1.28 | 1 | 1 | 3 | 0 | 100% | 0.9375 |
2COJ_PLP_B_410 | 80% | 29% | 0.123 | 0.972 | 1.42 | 1.55 | 2 | 4 | 0 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 32% | 0.039 | 0.989 | 1.43 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 40% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 23% | 0.045 | 0.993 | 1.94 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 17% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
1JF9_PLP_A_500 | 100% | 14% | 0.047 | 0.994 | 1.28 | 2.78 | 1 | 11 | 0 | 0 | 100% | 0.9375 |