RUB: RIBULOSE-1,5-DIPHOSPHATE
RUB is a Ligand Of Interest in 1RXO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1RXO_RUB_H_476 | 70% | 25% | 0.128 | 0.947 | 1.72 | 1.47 | 3 | 3 | 0 | 0 | 100% | 1 |
1RXO_RUB_B_476 | 59% | 25% | 0.141 | 0.925 | 1.73 | 1.47 | 3 | 3 | 0 | 0 | 100% | 1 |
1RXO_RUB_L_476 | 55% | 25% | 0.162 | 0.932 | 1.71 | 1.48 | 3 | 3 | 0 | 0 | 100% | 1 |
1RXO_RUB_E_476 | 54% | 25% | 0.151 | 0.915 | 1.7 | 1.48 | 3 | 3 | 0 | 0 | 100% | 1 |
4HHH_RUB_D_501 | 98% | 30% | 0.065 | 0.985 | 1.01 | 1.9 | - | 6 | 1 | 0 | 100% | 1 |
5YFJ_RUB_C_401 | 94% | 21% | 0.089 | 0.99 | 1.7 | 1.78 | 4 | 5 | 0 | 0 | 100% | 1 |
5YFU_RUB_A_401 | 91% | 45% | 0.1 | 0.989 | 0.81 | 1.35 | - | 2 | 1 | 0 | 100% | 1 |
5Z49_RUB_A_401 | 83% | 42% | 0.114 | 0.973 | 1.41 | 0.89 | 1 | 1 | 0 | 0 | 100% | 1 |
4MKV_RUB_C_501 | 83% | 4% | 0.12 | 0.978 | 4.11 | 1.7 | 5 | 3 | 1 | 0 | 100% | 1 |