PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 1QGN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1QGN_PLP_F_500 | 72% | 4% | 0.154 | 0.978 | 3.43 | 2.33 | 5 | 8 | 0 | 0 | 100% | 0.9375 |
1QGN_PLP_B_500 | 69% | 4% | 0.151 | 0.967 | 3.54 | 2.33 | 4 | 8 | 0 | 0 | 100% | 0.9375 |
1QGN_PLP_D_500 | 63% | 4% | 0.165 | 0.962 | 3.47 | 2.26 | 5 | 8 | 0 | 0 | 100% | 0.9375 |
1QGN_PLP_E_500 | 57% | 5% | 0.191 | 0.969 | 3.43 | 2.27 | 5 | 9 | 0 | 0 | 100% | 0.9375 |
1QGN_PLP_H_500 | 53% | 4% | 0.194 | 0.958 | 3.6 | 2.31 | 4 | 8 | 0 | 0 | 100% | 0.9375 |
1QGN_PLP_C_500 | 47% | 3% | 0.201 | 0.942 | 3.83 | 2.32 | 5 | 8 | 0 | 0 | 100% | 0.9375 |
1QGN_PLP_G_500 | 39% | 4% | 0.228 | 0.935 | 3.72 | 2.28 | 4 | 7 | 0 | 0 | 100% | 0.9375 |
1QGN_PLP_A_500 | 37% | 4% | 0.227 | 0.928 | 3.62 | 2.29 | 6 | 8 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 40% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
2BIE_PLP_B_1361 | 100% | 32% | 0.039 | 0.989 | 1.43 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
3WQC_PLP_B_402 | 100% | 23% | 0.045 | 0.993 | 1.94 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 17% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
1JF9_PLP_A_500 | 100% | 14% | 0.047 | 0.994 | 1.28 | 2.78 | 1 | 11 | 0 | 0 | 100% | 0.9375 |