GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1BHN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1BHN_GDP_C_161 | 53% | 12% | 0.147 | 0.909 | 1.44 | 2.75 | 3 | 9 | 6 | 0 | 100% | 0.5 |
1BHN_GDP_D_161 | 51% | 8% | 0.152 | 0.907 | 1.2 | 3.55 | 2 | 10 | 3 | 0 | 100% | 0.5 |
1BHN_GDP_A_161 | 39% | 17% | 0.178 | 0.883 | 1.31 | 2.43 | 2 | 8 | 7 | 0 | 100% | 0.5 |
1BHN_GDP_E_161 | 25% | 9% | 0.194 | 0.827 | 1.36 | 3.26 | 3 | 13 | 7 | 0 | 100% | 0.5 |
1BHN_GDP_F_161 | 23% | 14% | 0.229 | 0.851 | 1.18 | 2.86 | 2 | 8 | 4 | 0 | 100% | 0.5 |
1BHN_GDP_B_161 | 10% | 20% | 0.261 | 0.759 | 1.29 | 2.23 | 2 | 5 | 8 | 0 | 100% | 0.5 |
1RRG_GDP_A_183 | 100% | 19% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |