6ZXP

Solution structure of the C-terminal domain of the vaccinia virus DNA polymerase processivity factor component A20 fused to a short peptide from the viral DNA polymerase E9.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
115N-Trosy1 mM [U-15N] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
213C-HSQC0.8 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
32D-Tocsy1 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
43D HNCO0.8 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
53D HNCACB0.8 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
113D HN(COCA)CB0.8 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
103D HCCH-TOCSY0.8 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
93D-15N-edited NOESY1 mM [U-15N] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
83D-13C edited NOESY0.8 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
73D-13C-13C methyl noesy0.8 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
62D NOESY1 mM [U-15N13C] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 950
1415N-R11 mM [U-15N] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 700
1315N-R21 mM [U-15N] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 700
1215N hetNOE1 mM [U-15N] A20-i3, 50 mM potassium phosphate, 300 mM NaCl, 1.2 mM TCEP90% H2O/10% D2O0.3 M61 atm298Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE950
2BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsin explicit waterCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingTopSpinBruker Biospin
3chemical shift assignmentCcpNmr AnalysisCCPN
4peak pickingUNIOTorsten Herrmann
5structure calculationARIALinge, O'Donoghue and Nilges
6structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read