6XYV

NMR solution structure of the Iron-Sulfur protein PioC from Rhodopseudomonas palustris TIE-1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
23D HNCO500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
33D HNCA500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
43D CBCANH500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
53D CBCA(CO)NH500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
63D HNCACO500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
73D HBHA(CO)NH500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
83D HNHA500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
122D 1H-13C HSQC500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
112D 1H-1H TOCSY500 uM PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 600
102D 1H-1H NOESY500 uM PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
93D HCCH-TOCSY500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
163D 1H-15N NOESY150 uM [U-99% 15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE III 900
153D 1H-13C NOESY aliphatic500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE 950
142D relaxation experiments150 uM [U-99% 15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE 500
132D CON500 uM [U-13C; U-15N] PioC90% H2O/10% D2O300 mM5.61 atm298Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III900
3BrukerAVANCE500
4BrukerAVANCE950
5BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number2000
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCARAKeller and Wuthrich
2structure calculationCYANA2.1Guntert, Mumenthaler and Wuthrich
3collectionTopSpin3.16Bruker Biospin
4processingTopSpin3.16Bruker Biospin
5refinementAmber16Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman