6OBK
NMR structure of Orf47 from Lactococcus virus P2
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H COSY | 20 mM potassium phosphate, 50 mM potassium chloride | 90% H2O/10% D2O | 50 KCl mM | 6.3 | 1 atm | 303 | Varian INOVA 600 |
2 | 2D 1H-1H TOCSY | 20 mM potassium phosphate, 50 mM potassium chloride | 90% H2O/10% D2O | 50 KCl mM | 6.3 | 1 atm | 303 | Varian INOVA 600 |
3 | 2D 1H-1H NOESY | 20 mM potassium phosphate, 50 mM potassium chloride | 90% H2O/10% D2O | 50 KCl mM | 6.3 | 1 atm | 303 | Varian INOVA 600 |
4 | 2D 1H-15N HSQC | 20 mM potassium phosphate, 50 mM potassium chloride | 90% H2O/10% D2O | 50 KCl mM | 6.3 | 1 atm | 303 | Varian INOVA 600 |
5 | 2D 1H-13C HSQC | 20 mM potassium phosphate, 50 mM potassium chloride | 90% H2O/10% D2O | 50 KCl mM | 6.3 | 1 atm | 303 | Varian INOVA 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
2 | structure calculation | CYANA | 3.97 | Guntert, Mumenthaler and Wuthrich |
3 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
4 | peak picking | NMRView | Johnson, One Moon Scientific | |
5 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
6 | data analysis | TALOS | Cornilescu, Delaglio and Bax |