6NVZ
NMR Structure of the DNA binding domain of EhMybS3
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
5 | 2D 1H-1H TOCSY | 1.5 mM EhMybS3 | 95% H2O/5% D2O | 7.0 | 1 atm | 298 | Bruker AMX 700 | |
6 | 2D 1H-1H NOESY | 1.5 mM EhMybS3 | 95% H2O/5% D2O | 7.0 | 1 atm | 298 | Bruker AMX 700 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 700 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | Amber |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
3 | chemical shift assignment | CARA | 1.8 | Keller and Wuthrich |
2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
4 | refinement | Amber | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman |