6IB6

Solution structure of the water-soluble LU-domain of human Lypd6 protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY0.1 mM [U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 600
23D HNCA0.1 mM [U-99% 13C; U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 800
33D HNCACB0.1 mM [U-99% 13C; U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 800
43D CBCA(CO)NH0.1 mM [U-99% 13C; U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 600
52D 1H-15N HSQC0.1 mM [U-99% 13C; U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 600
62D 1H-13C HSQC aliphatic0.1 mM [U-99% 13C; U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 600
73D HNCO0.1 mM [U-99% 13C; U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 600
83D HCCH-TOCSY0.1 mM [U-99% 13C; U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 600
92D 1H-1H TOCSY0.1 mM [U-99% 15N] Lypd6sh95% H2O/5% D2O20 mM7.0AMBIENT Pa303Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
2BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number500
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure calculationCYANA3.97Guntert, Mumenthaler and Wuthrich
2collectionTopSpin3.97Bruker Biospin
3chemical shift assignmentCARAKeller and Wuthrich