X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP29320 mM 1,6-hexanediol; 20 mM 1,2-propanediol; 20 mM 1,4-butanediol; 20 mM 1-butanol; 20 mM 2-propanol; 20 mM 1,3-propanediol; 100 mM Imidazol/MES pH 6.5; 20 % ethylene glycol; 10 % PEG 8000K
Crystal Properties
Matthews coefficientSolvent content
2.1342.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 68.508α = 90
b = 229.469β = 90
c = 80.709γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2016-09-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I240.97889DiamondI24

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.966.11000.99810.611.750611
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.91.941000.6362.29.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.966.0150568252499.9290.2030.20090.2434RANDOM33.183
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.741-3.751.008
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.857
r_dihedral_angle_4_deg19.947
r_dihedral_angle_3_deg14.536
r_dihedral_angle_1_deg7.115
r_lrange_it6.267
r_lrange_other6.241
r_scangle_other5.43
r_scangle_it5.426
r_mcangle_it3.829
r_mcangle_other3.828
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.857
r_dihedral_angle_4_deg19.947
r_dihedral_angle_3_deg14.536
r_dihedral_angle_1_deg7.115
r_lrange_it6.267
r_lrange_other6.241
r_scangle_other5.43
r_scangle_it5.426
r_mcangle_it3.829
r_mcangle_other3.828
r_scbond_it3.798
r_scbond_other3.785
r_mcbond_it2.949
r_mcbond_other2.945
r_angle_refined_deg1.835
r_angle_other_deg1.472
r_metal_ion_refined0.327
r_nbd_refined0.212
r_nbd_other0.187
r_symmetry_nbd_other0.184
r_nbtor_refined0.177
r_xyhbond_nbd_refined0.166
r_symmetry_xyhbond_nbd_refined0.092
r_symmetry_nbtor_other0.083
r_chiral_restr0.082
r_symmetry_nbd_refined0.066
r_symmetry_xyhbond_nbd_other0.065
r_bond_refined_d0.012
r_gen_planes_refined0.011
r_gen_planes_other0.003
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3473
Nucleic Acid Atoms
Solvent Atoms279
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement
GDAdata collection
MOSFLMdata reduction
Aimlessdata scaling
SHELXCDphasing
SHELXEmodel building
BUCCANEERmodel building
Cootmodel building