6CFB

Isolation, Characterization, and Synthesis of the Barrettides: Disulfide-Containing Peptides from the Marine Sponge Geodia barretti


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1.2 mM barrettide A90% H2O/10% D2O0 M5.15ambient atm298Bruker AVANCE 600
22D 1H-1H TOCSY1.2 mM barrettide A90% H2O/10% D2O0 M5.15ambient atm298Bruker AVANCE 600
32D 1H-15N HSQC1.2 mM barrettide A90% H2O/10% D2O0 M5.15ambient atm298Bruker AVANCE 600
42D 1H-13C HSQC0.62 mM barrettide A100% D2O0 M5.15ambient atm298Bruker AVANCE 600
52D 1H-1H NOESY0.62 mM barrettide A100% D2O0 M5.15ambient atm298Bruker AVANCE 600
62D 1H-1H TOCSY0.62 mM barrettide A100% D2O0 M5.15ambient atm298Bruker AVANCE 600
72D 1H-1H ECOSY0.62 mM barrettide A100% D2O0 M5.15ambient atm298Bruker AVANCE 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealingStructures were calculated using torsion angle dynamics and subsequently refined and energy minimised in explicit solvent using Cartesian dynamics within CNS.CNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
2data analysisCcpNMRCCPN
7structure calculationCYANAGuntert, Mumenthaler and Wuthrich
4structure calculationCYANAGuntert, Mumenthaler and Wuthrich
6refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
8data analysisTALOSCornilescu, Delaglio and Bax