SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
22D 1H-13C HSQC0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
32D 1H-1H TOCSY0.5 mM Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
42D 1H-1H NOESY0.5 mM Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
53D HNCO0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
63D HNCOi0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
73D HNCA0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
83D HNCAi0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
93D HNCACB0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
103D CBCA(CO)NH0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
113D H(CCCO)NH0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
123D (H)CC(CO)NH0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
133D HCCH-TOCSY0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
143D HCCH-TOCSY0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
153D H(NCOCA)NH0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
163D (H)N(COCA)NH0.5 mM [U-99% 13C; U-99% 15N] Excalibur domain of CbpL, 3 mM CaCl2, 1 % DSS90% H2O/10% D2Ounknown5.5unknown atm298.15Bruker AVANCE 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsthe 20 conformers with the lowest targer funciotn values fo CYANA calculation were selected for further refinement and minimized with amber 9.0 using Gibbs-Boltzman continuum solvation modelAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin2.1Bruker Biospin
2processingTopSpin2.1Bruker Biospin
3processingNMRPipe3.0Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4data analysisSparky3.113Goddard
5peak pickingSparky3.113Goddard
6data analysisNMRView5.0.20Johnson, One Moon Scientific
7structure calculationCYANA2.1Guntert, Mumenthaler and Wuthrich
8refinementAmber9.0Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman