X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
10.01M ZINC CHLORIDE, 0.1M SODIUM ACETATE PH 5 AND 20% (W/V) PEG 6000
Crystal Properties
Matthews coefficientSolvent content
2.4549.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.4α = 90
b = 66.95β = 99.14
c = 97.47γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray77 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I24DiamondI24

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8535.9499.30.0812.63.3706202
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.851.999.80.792.23.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUTNONE1.8596.2367037356499.230.181730.180250.20878RANDOM27.619
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.23-1.090.33-0.2
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.905
r_dihedral_angle_4_deg16.021
r_dihedral_angle_3_deg13.003
r_dihedral_angle_1_deg6.384
r_mcangle_it2.658
r_scbond_it2.056
r_angle_refined_deg1.843
r_angle_other_deg1.665
r_mcbond_it1.613
r_mcbond_other1.612
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.905
r_dihedral_angle_4_deg16.021
r_dihedral_angle_3_deg13.003
r_dihedral_angle_1_deg6.384
r_mcangle_it2.658
r_scbond_it2.056
r_angle_refined_deg1.843
r_angle_other_deg1.665
r_mcbond_it1.613
r_mcbond_other1.612
r_chiral_restr0.101
r_bond_refined_d0.018
r_gen_planes_refined0.012
r_bond_other_d0.011
r_gen_planes_other0.009
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5708
Nucleic Acid Atoms
Solvent Atoms556
Heterogen Atoms

Software

Software
Software NamePurpose
autoSHARPmodel building
XDSdata reduction
XSCALEdata scaling
AutoSolphasing
autoSHARPphasing
REFMACrefinement