4O62

CW-type zinc finger of ZCWPW2 in complex with the amino terminus of histone H3


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION7.52912 M ammonium sulfate, 2% PEG400, 0.1 M sodium HEPES, pH 7.5, vapor diffusion, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
4.673

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 127.095α = 90
b = 127.095β = 90
c = 63.046γ = 120
Symmetry
Space GroupH 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152013-02-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID1.28303APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.7841.461000.0720.15.536371
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.781.821000.0111.55.52051

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.7841.4636369158799.920.16560.16460.186THIN SHELLS (SFTOOLS)36.6352
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.01-0.5-1.013.27
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.335
r_dihedral_angle_4_deg16.769
r_dihedral_angle_3_deg10.11
r_dihedral_angle_1_deg6.334
r_mcangle_it3.334
r_mcbond_it2.489
r_mcbond_other2.448
r_angle_refined_deg1.37
r_angle_other_deg0.747
r_chiral_restr0.092
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.335
r_dihedral_angle_4_deg16.769
r_dihedral_angle_3_deg10.11
r_dihedral_angle_1_deg6.334
r_mcangle_it3.334
r_mcbond_it2.489
r_mcbond_other2.448
r_angle_refined_deg1.37
r_angle_other_deg0.747
r_chiral_restr0.092
r_bond_refined_d0.015
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1462
Nucleic Acid Atoms
Solvent Atoms169
Heterogen Atoms30

Software

Software
Software NamePurpose
Aimlessdata scaling
SHELXphasing
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction