4MOU

Crystal Structure of an Enoyl-CoA Hydratase/Isomerase Family Member, NYSGRC target 028282


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.52890.2M Calcium Acetate, 0.1M Cacodylate pH 6.5, 40% PEG 300, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties
Matthews coefficientSolvent content
3.0159.14

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 160.455α = 90
b = 160.455β = 90
c = 178.691γ = 90
Symmetry
Space GroupI 41 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray173CCDMARMOSAIC 225 mm CCDBeryllium Lenses2013-06-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-F0.97872APS21-ID-F

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.24096.856774
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.2484.60.5491.9532437

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.2539.0651216272897.490.1730.1710.2107RANDOM25.6398
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.530.53-1.05
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.287
r_dihedral_angle_4_deg18.213
r_dihedral_angle_3_deg13.513
r_dihedral_angle_1_deg5.459
r_angle_refined_deg1.804
r_angle_other_deg1.239
r_chiral_restr0.104
r_bond_refined_d0.018
r_gen_planes_refined0.01
r_bond_other_d0.008
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.287
r_dihedral_angle_4_deg18.213
r_dihedral_angle_3_deg13.513
r_dihedral_angle_1_deg5.459
r_angle_refined_deg1.804
r_angle_other_deg1.239
r_chiral_restr0.104
r_bond_refined_d0.018
r_gen_planes_refined0.01
r_bond_other_d0.008
r_gen_planes_other0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5735
Nucleic Acid Atoms
Solvent Atoms565
Heterogen Atoms15

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
SHELXphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-3000data reduction
HKL-3000data scaling
SHELXDphasing