X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP827750 mM Tris-HCl, 23-25% PEG8000, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.3848.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 83.906α = 90
b = 105.075β = 90
c = 153.888γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2011-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-10.99987ESRFID23-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.6586.77639816

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.6546.1439816200099.130.20530.20280.2503RANDOM79.1204
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
8.3-2.95-5.35
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg19.269
r_dihedral_angle_4_deg9.206
r_dihedral_angle_3_deg9.129
r_mcangle_it7.246
r_scbond_it5.469
r_mcbond_it4.598
r_dihedral_angle_1_deg3.039
r_angle_refined_deg0.424
r_chiral_restr0.031
r_bond_refined_d0.001
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg19.269
r_dihedral_angle_4_deg9.206
r_dihedral_angle_3_deg9.129
r_mcangle_it7.246
r_scbond_it5.469
r_mcbond_it4.598
r_dihedral_angle_1_deg3.039
r_angle_refined_deg0.424
r_chiral_restr0.031
r_bond_refined_d0.001
r_gen_planes_refined0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms10028
Nucleic Acid Atoms
Solvent Atoms192
Heterogen Atoms8

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
MxCuBEdata collection
XDSdata reduction
XDSdata scaling
MOLREPphasing